Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AC016251.1-201ENST00000624299 4198 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AL133243.3-201ENST00000617415 3004 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 HM13-224ENST00000498035 3932 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 UG0898H09-202ENST00000623646 7040 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RMST-210ENST00000640149 2844 ntTSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AHNAK2-204ENST00000557457 3436 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ADAM24P-201ENST00000398655 2101 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC00930-202ENST00000557075 1541 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 CDH18-202ENST00000382275 3087 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AC006058.1-201ENST00000568686 5067 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AC104260.2-201ENST00000623551 3497 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 HCG18-242ENST00000602319 3342 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 Z97832.2-201ENST00000605896 4261 ntBASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-4Q9BYR3 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms