Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 RNU6-328P-201ENST00000390887 106 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 RNU4-26P-201ENST00000410270 107 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 RPLP0P7-201ENST00000416050 667 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 RPL17P35-201ENST00000432217 549 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AL592437.1-201ENST00000443781 492 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC104687.1-201ENST00000485829 412 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 RNU6-1308P-201ENST00000516817 103 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC009163.5-201ENST00000575421 637 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 ZNF92P2-201ENST00000600543 1059 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC034236.3-201ENST00000605999 461 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AP004607.9-201ENST00000618202 316 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC241585.2-209ENST00000638217 143 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 RNU6-650P-201ENST00000365658 111 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 RNA5SP239-201ENST00000410218 129 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 RNA5SP458-201ENST00000516188 119 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AL442163.2-201ENST00000553912 710 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 MIR548Y-201ENST00000582739 110 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AC107294.3-201ENST00000609211 526 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AC084824.5-201ENST00000612009 413 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 SNORD62.1-201ENST00000362541 86 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 Y_RNA.118-201ENST00000363300 101 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 CCNB2P1-201ENST00000399411 1150 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 RNU4-27P-201ENST00000410889 139 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AL590399.6-201ENST00000446396 307 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AL157827.1-201ENST00000447622 132 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 OR4H12P-201ENST00000556269 907 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AC096947.1-201ENST00000603233 470 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 AL512506.1-201ENST00000613918 449 ntBASIC2.69□□□□□ -1.98
SHROOM3Q8TF72 MTCO1P9-201ENST00000505577 1534 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AL136964.1-201ENST00000622038 2990 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 XIAPP3-201ENST00000312918 795 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 UBE2V1P15-201ENST00000407776 448 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 SDCBPP3-201ENST00000419629 891 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 MRPL50P4-201ENST00000446432 475 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 NDUFS5P3-201ENST00000450668 321 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AC021205.1-201ENST00000468797 348 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AP003049.1-201ENST00000529418 457 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AL392112.1-201ENST00000605115 829 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AC104307.1-201ENST00000616142 196 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AC067852.7-201ENST00000623270 535 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AC092159.4-201ENST00000624944 550 ntBASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHROOM3Q8TF72 AC110792.3-201ENST00000595906 1614 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 Y_RNA.238-201ENST00000364441 102 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AL590004.2-201ENST00000404787 371 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 USP9YP20-201ENST00000419224 558 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 MTCYBP12-201ENST00000440559 1134 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC017099.1-201ENST00000448261 1028 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC078785.3-201ENST00000476607 425 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC126182.1-201ENST00000478134 357 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 RPS29P21-201ENST00000496272 170 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 RNA5SP148-201ENST00000516527 94 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 IGKV3-31-201ENST00000523109 329 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms