Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 RNU6-335P-201ENST00000364563 113 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 RNU6-354P-201ENST00000383862 107 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 RNU6-610P-201ENST00000384264 107 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 RNU6-932P-201ENST00000391108 106 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC005517.2-201ENST00000424673 553 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 FO393414.1-201ENST00000428697 1184 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 MOB1AP2-201ENST00000446060 614 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC140076.1-201ENST00000449897 361 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 CDC42P1-201ENST00000456658 548 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 MTCO2P9-201ENST00000503214 694 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC007536.1-201ENST00000533382 349 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC024220.1-201ENST00000603675 484 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AL159169.3-201ENST00000608871 561 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC231759.1-201ENST00000616455 597 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC026422.1-201ENST00000623961 452 ntBASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC65Q8IXS2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 BMS1P22-201ENST00000414726 313 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC093151.1-201ENST00000427711 313 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 RNU7-140P-201ENST00000459546 60 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC146507.2-201ENST00000460608 476 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AL136126.1-201ENST00000473603 402 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC112518.2-201ENST00000508565 425 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 MTCO2P32-201ENST00000514865 403 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 RNU6-334P-201ENST00000517072 102 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC113192.3-201ENST00000529152 742 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AL136520.1-202ENST00000555494 763 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 MIR4504-201ENST00000577413 92 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC016542.1-201ENST00000608259 493 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AL392048.1-201ENST00000613946 534 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC004777.1-201ENST00000624317 287 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC106730.3-201ENST00000624568 641 ntBASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC65Q8IXS2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 MIR22-201ENST00000362190 85 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 SNORA26.7-201ENST00000391288 122 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AL355379.1-201ENST00000405542 640 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 RNA5SP344-201ENST00000411081 104 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 RNU2-72P-201ENST00000411175 163 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC008280.1-201ENST00000418851 412 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC246680.2-201ENST00000422106 389 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 RPL17P49-201ENST00000443728 411 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AL050341.1-201ENST00000447743 313 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 RPL36AP33-201ENST00000450395 310 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 RPL21P18-201ENST00000469899 480 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC087879.1-201ENST00000474343 374 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 RPS3AP43-201ENST00000479743 781 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 HMGB1P38-201ENST00000490557 577 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 RNU6-488P-201ENST00000515918 99 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms