Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.06□□□□□ -2.24
USH2AO75445 PHKBP1-201ENST00000450951 1951 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AC097714.1-201ENST00000511272 1647 ntBASIC1.06□□□□□ -2.24
USH2AO75445 MIR598-201ENST00000384868 97 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RNU2-2P-201ENST00000410396 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RNU6-55P-201ENST00000411092 107 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RNU6-954P-201ENST00000411355 107 ntBASIC1.06□□□□□ -2.24
USH2AO75445 TPMTP3-201ENST00000411928 735 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AC098826.1-201ENST00000433943 471 ntBASIC1.06□□□□□ -2.24
USH2AO75445 OR5H3P-201ENST00000502817 919 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC1.06□□□□□ -2.24
USH2AO75445 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.06□□□□□ -2.24
USH2AO75445 SNRPGP18-201ENST00000553000 214 ntBASIC1.06□□□□□ -2.24
USH2AO75445 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.06□□□□□ -2.24
USH2AO75445 AC090115.4-201ENST00000609970 188 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.15-201ENST00000611544 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.16-201ENST00000613119 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.12-201ENST00000613778 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.20-201ENST00000613956 192 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.9-201ENST00000615427 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.11-201ENST00000616345 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.2-201ENST00000616535 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AL158196.1-201ENST00000616786 434 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.3-201ENST00000617785 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.19-201ENST00000618602 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RNU2-1-201ENST00000618664 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.6-201ENST00000619225 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.5-201ENST00000619465 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 U2.10-201ENST00000620268 191 ntBASIC1.06□□□□□ -2.24
USH2AO75445 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
USH2AO75445 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
USH2AO75445 Y_RNA.303-201ENST00000364998 94 ntBASIC1.05□□□□□ -2.24
USH2AO75445 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
USH2AO75445 RPS3AP9-201ENST00000417027 792 ntBASIC1.05□□□□□ -2.24
USH2AO75445 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC1.05□□□□□ -2.24
USH2AO75445 SUB1P3-201ENST00000564581 315 ntBASIC1.05□□□□□ -2.24
USH2AO75445 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.05□□□□□ -2.24
USH2AO75445 AL022099.1-201ENST00000604551 712 ntBASIC1.05□□□□□ -2.24
USH2AO75445 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.05□□□□□ -2.24
USH2AO75445 AL445437.1-201ENST00000623157 3087 ntBASIC1.05□□□□□ -2.24
USH2AO75445 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
USH2AO75445 U8.10-201ENST00000384260 133 ntBASIC1.05□□□□□ -2.24
USH2AO75445 RNU1-57P-201ENST00000384491 166 ntBASIC1.05□□□□□ -2.24
USH2AO75445 OR2X1P-201ENST00000421144 687 ntBASIC1.05□□□□□ -2.24
USH2AO75445 AL358075.3-201ENST00000426289 226 ntBASIC1.05□□□□□ -2.24
USH2AO75445 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.05□□□□□ -2.24
USH2AO75445 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.05□□□□□ -2.24
USH2AO75445 RAD21-204ENST00000518055 896 ntTSL 2 BASIC1.05□□□□□ -2.24
USH2AO75445 FAM60DP-201ENST00000524174 632 ntBASIC1.05□□□□□ -2.24
USH2AO75445 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
USH2AO75445 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC1.05□□□□□ -2.24
USH2AO75445 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
USH2AO75445 RNA5SP190-201ENST00000365222 118 ntBASIC1.05□□□□□ -2.24
USH2AO75445 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
USH2AO75445 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.05□□□□□ -2.24
USH2AO75445 ATP5EP1-201ENST00000510257 156 ntBASIC1.05□□□□□ -2.24
USH2AO75445 RPPH1-2P-201ENST00000516688 293 ntBASIC1.05□□□□□ -2.24
USH2AO75445 RNA5SP102-201ENST00000516865 106 ntBASIC1.05□□□□□ -2.24
USH2AO75445 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.05□□□□□ -2.24
USH2AO75445 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.05□□□□□ -2.24
USH2AO75445 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.05□□□□□ -2.24
USH2AO75445 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC1.05□□□□□ -2.24
USH2AO75445 CDC27P2-201ENST00000425026 1922 ntBASIC1.05□□□□□ -2.24
USH2AO75445 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
USH2AO75445 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
USH2AO75445 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
USH2AO75445 RNU2-17P-201ENST00000410290 190 ntBASIC1.05□□□□□ -2.24
USH2AO75445 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.05□□□□□ -2.24
USH2AO75445 SDCBPP3-201ENST00000419629 891 ntBASIC1.05□□□□□ -2.24
USH2AO75445 GAPDHP27-201ENST00000447427 1020 ntBASIC1.05□□□□□ -2.24
USH2AO75445 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.05□□□□□ -2.24
USH2AO75445 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.05□□□□□ -2.24
USH2AO75445 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
USH2AO75445 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
USH2AO75445 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 AC022336.2-201ENST00000568966 2538 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AP005901.5-201ENST00000545779 1796 ntBASIC1.04□□□□□ -2.24
USH2AO75445 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.04□□□□□ -2.24
USH2AO75445 SNORD56.3-201ENST00000363507 71 ntBASIC1.04□□□□□ -2.24
USH2AO75445 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.04□□□□□ -2.24
USH2AO75445 AC009237.2-201ENST00000421358 284 ntBASIC1.04□□□□□ -2.24
USH2AO75445 MED6P1-201ENST00000439659 713 ntBASIC1.04□□□□□ -2.24
USH2AO75445 RNU1-123P-201ENST00000458950 160 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AC093278.1-201ENST00000494700 600 ntBASIC1.04□□□□□ -2.24
USH2AO75445 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 CKS1BP7-201ENST00000522230 235 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AL591516.1-201ENST00000611326 274 ntBASIC1.04□□□□□ -2.24
USH2AO75445 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 XPOTP1-201ENST00000443317 2398 ntBASIC1.04□□□□□ -2.24
USH2AO75445 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
USH2AO75445 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
USH2AO75445 AL160275.2-201ENST00000412010 394 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms