Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 Y_RNA.176-201ENST00000363815 109 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RNU1-59P-201ENST00000364829 162 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RNU6-702P-201ENST00000364982 107 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 SNORA23-201ENST00000365128 182 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RNU6-1318P-201ENST00000365389 103 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RNY1P14-201ENST00000384426 108 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.557-201ENST00000384680 107 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RNU11-201ENST00000387069 134 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RPL23AP17-201ENST00000401064 499 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.594-201ENST00000410373 140 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 MYL6P5-201ENST00000412707 459 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 MRPS18BP2-201ENST00000434310 759 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 NEFMP1-201ENST00000443423 1006 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RPL7L1P1-201ENST00000448259 785 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RPL12P25-201ENST00000455592 494 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RPS3AP41-201ENST00000462701 778 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC104472.2-201ENST00000469035 601 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC128713.1-201ENST00000471495 306 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC117503.1-201ENST00000472241 394 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RN7SL717P-201ENST00000478343 297 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC022360.1-201ENST00000521058 340 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AP002404.1-201ENST00000532005 451 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC007225.2-201ENST00000562529 256 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC007448.1-201ENST00000582714 234 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC067852.3-201ENST00000589177 561 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC067852.4-201ENST00000590314 478 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AL360012.1-201ENST00000602813 131 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 MIR6809-201ENST00000612189 116 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 MIR6886-201ENST00000619864 61 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AC109446.4-201ENST00000623235 2755 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 STX3-208ENST00000641815 3236 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 MIR375-201ENST00000362103 64 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 MIR135A2-201ENST00000384854 100 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 RNU6-293P-201ENST00000411259 106 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 RPL7P37-201ENST00000425095 738 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC236972.1-201ENST00000433225 199 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC073410.1-201ENST00000435125 589 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AL445928.1-201ENST00000435545 222 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 HIGD1AP11-201ENST00000438361 280 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AL359672.1-201ENST00000442302 409 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 SDC4P-201ENST00000453285 601 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC124945.1-201ENST00000485133 188 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 MRPS35P2-201ENST00000508242 191 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC116655.1-201ENST00000508324 901 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC114781.3-201ENST00000512083 142 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.661-201ENST00000516003 99 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.670-201ENST00000516255 105 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 RNU6-390P-201ENST00000516259 103 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.689-201ENST00000516589 107 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 RNU6-307P-201ENST00000516743 106 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC026371.1-201ENST00000551867 419 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 PRR13P7-201ENST00000605538 430 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC090425.1-201ENST00000610007 140 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 AC006157.1-201ENST00000611750 366 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms