Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PRDM15-203ENST00000422911 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SALL4P2-201ENST00000423288 2910 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.477-201ENST00000384352 108 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.545-201ENST00000384652 105 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNY4P30-201ENST00000410216 95 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU4-27P-201ENST00000410889 139 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MYL6P5-201ENST00000412707 459 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC008267.5-201ENST00000424928 265 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RPL21P89-201ENST00000444021 467 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RN7SKP116-201ENST00000516902 319 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AP005435.4-201ENST00000529514 284 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SYF2P1-201ENST00000550658 413 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC137800.2-201ENST00000574375 120 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC087499.8-201ENST00000578406 226 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC008759.3-201ENST00000613300 508 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MIR3653-201ENST00000625572 110 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 TEK-202ENST00000406359 3935 ntTSL 2 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AL590240.1-201ENST00000334118 313 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 MIR7-2-201ENST00000384970 110 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 MIR541-201ENST00000401360 84 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AL136116.2-201ENST00000404020 785 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 RNU2-28P-201ENST00000410457 189 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AC109780.2-201ENST00000413467 845 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 UBE2FP1-201ENST00000416536 447 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AL139095.3-201ENST00000419672 1203 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AL391219.1-201ENST00000422570 483 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AL353678.1-201ENST00000422735 741 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 RAC1P6-201ENST00000423911 575 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 RNF19BPX-201ENST00000426224 625 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AC005534.2-201ENST00000431047 433 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 YWHAZP7-201ENST00000436906 631 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AC115115.1-201ENST00000449927 248 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 MIR2053-201ENST00000459295 91 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 MYL12BP2-201ENST00000503948 512 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 RNU6-313P-201ENST00000516317 112 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 Vault.1-201ENST00000516474 102 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 OR4P1P-201ENST00000530808 1136 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 AL353748.2-201ENST00000622148 471 ntBASIC1.51□□□□□ -2.17
HMCN1Q96RW7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMCN1Q96RW7 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms