Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 CRYM-AS1-204ENST00000637983 556 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AC016717.2-201ENST00000609089 5141 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 SNORA64-201ENST00000384674 134 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AC006960.1-201ENST00000419980 153 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 MIR4506-201ENST00000584693 77 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AC092184.1-201ENST00000625042 715 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AL590004.2-201ENST00000404787 371 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 SEC63P1-201ENST00000425785 1258 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 MIR1291-201ENST00000627649 87 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AC109315.1-201ENST00000584143 1347 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 RNU1-75P-201ENST00000347264 129 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 AL662791.1-201ENST00000441992 928 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 HMGB1P48-201ENST00000446155 598 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 OR5D17P-201ENST00000531492 978 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 OR11H5P-201ENST00000554039 926 ntBASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.71□□□□□ -2.14
ALMS1Q8TCU4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 RNA5SP213-201ENST00000391031 106 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 MTCYBP14-201ENST00000457471 715 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 BNIP3P8-201ENST00000597863 560 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 MTND5P7-201ENST00000413558 1798 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 RNA5SP88-201ENST00000365560 109 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC245517.4-201ENST00000448601 281 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AP002770.2-201ENST00000543613 532 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 SNORD114-1-201ENST00000362705 72 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC096725.1-201ENST00000514266 313 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC021733.2-201ENST00000518830 497 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 MTCO3P13-201ENST00000577757 781 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC007687.1-201ENST00000602704 304 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC016877.3-201ENST00000606778 504 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 AC046143.2-201ENST00000609789 160 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 MIR6873-201ENST00000622788 63 ntBASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ALMS1Q8TCU4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC243772.1-201ENST00000451620 410 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC068587.2-201ENST00000478386 781 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RPL21P99-201ENST00000480369 423 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC016687.1-201ENST00000482574 353 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 SNORD116-26-201ENST00000516006 96 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 FAM60DP-201ENST00000524174 632 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AK6P1-201ENST00000540219 478 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 MIR4498-201ENST00000577599 66 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC012119.1-201ENST00000603184 222 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RNU6-253P-201ENST00000384730 105 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RPL36AP6-201ENST00000435770 321 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RN7SL633P-201ENST00000488974 297 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RNA5SP281-201ENST00000516504 135 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AL353997.5-201ENST00000618886 171 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms