Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.94□□□□□ -1.3
NUBP1P53384 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
NUBP1P53384 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 RNU6-527P-201ENST00000363425 104 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 RNU6-105P-201ENST00000363909 104 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 SNORA22-201ENST00000383907 134 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NUBP1P53384 RNU6-381P-201ENST00000391259 108 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.94□□□□□ -1.3
NUBP1P53384 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.94□□□□□ -1.3
NUBP1P53384 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC6.94□□□□□ -1.3
NUBP1P53384 GSTM5P1-201ENST00000434751 660 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.94□□□□□ -1.3
NUBP1P53384 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.94□□□□□ -1.3
NUBP1P53384 AC093870.1-201ENST00000506837 213 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 AC007537.1-201ENST00000539347 327 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 UBL5P4-201ENST00000562584 236 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 SNORD84-203ENST00000584275 78 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 AC091133.5-201ENST00000603088 301 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 MIR3658-201ENST00000636291 56 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.94□□□□□ -1.3
NUBP1P53384 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NUBP1P53384 AC036108.4-201ENST00000611654 2516 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 AC009237.3-203ENST00000442128 3551 ntBASIC6.94□□□□□ -1.3
NUBP1P53384 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC6.94□□□□□ -1.3
NUBP1P53384 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
NUBP1P53384 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.93□□□□□ -1.3
NUBP1P53384 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.93□□□□□ -1.3
NUBP1P53384 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
NUBP1P53384 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.93□□□□□ -1.3
NUBP1P53384 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 MIR323A-201ENST00000362199 86 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 RNA5SP321-201ENST00000362722 111 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 Y_RNA.245-201ENST00000364493 95 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 RNA5SP44-201ENST00000410446 133 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 BPY2DP-201ENST00000422208 265 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 RNU5E-3P-201ENST00000515913 68 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 AC015801.1-201ENST00000585651 153 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.93□□□□□ -1.3
NUBP1P53384 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC6.93□□□□□ -1.3
NUBP1P53384 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.93□□□□□ -1.3
NUBP1P53384 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.93□□□□□ -1.3
NUBP1P53384 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC6.93□□□□□ -1.3
NUBP1P53384 FLJ42393-201ENST00000623801 2270 ntBASIC6.93□□□□□ -1.3
NUBP1P53384 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUBP1P53384 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.92□□□□□ -1.3
NUBP1P53384 ZNF658B-201ENST00000602828 3408 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
NUBP1P53384 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
NUBP1P53384 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.92□□□□□ -1.3
NUBP1P53384 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.92□□□□□ -1.3
NUBP1P53384 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
NUBP1P53384 RNU5F-3P-201ENST00000363767 117 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 RN7SKP124-201ENST00000364730 341 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 RNU6-166P-201ENST00000384371 107 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.92□□□□□ -1.3
NUBP1P53384 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NUBP1P53384 AC079355.1-201ENST00000421770 223 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 AL078601.1-201ENST00000444542 271 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 AC016027.4-201ENST00000450866 277 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC6.92□□□□□ -1.3
NUBP1P53384 snoU13.3-201ENST00000459441 104 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 AC068228.1-201ENST00000461723 211 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 AL049874.1-201ENST00000489560 388 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 RN7SKP122-201ENST00000515923 296 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 CYCSP23-201ENST00000519781 313 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 AC100767.1-201ENST00000528178 123 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms