Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 AC008264.1-201ENST00000447612 367 ntBASIC3.24□□□□□ -1.89
RETP07949 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RETP07949 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
RETP07949 AC104689.1-201ENST00000473356 768 ntBASIC3.24□□□□□ -1.89
RETP07949 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.24□□□□□ -1.89
RETP07949 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 AC008628.1-201ENST00000508663 265 ntBASIC3.24□□□□□ -1.89
RETP07949 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.24□□□□□ -1.89
RETP07949 AC008885.1-201ENST00000514930 301 ntBASIC3.24□□□□□ -1.89
RETP07949 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
RETP07949 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.24□□□□□ -1.89
RETP07949 AL136520.1-202ENST00000555494 763 ntBASIC3.24□□□□□ -1.89
RETP07949 YWHAQP7-201ENST00000603536 658 ntBASIC3.24□□□□□ -1.89
RETP07949 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
RETP07949 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RETP07949 RNU6-156P-201ENST00000621869 107 ntBASIC3.24□□□□□ -1.89
RETP07949 AC106730.3-201ENST00000624568 641 ntBASIC3.24□□□□□ -1.89
RETP07949 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.24□□□□□ -1.89
RETP07949 MIR4496-201ENST00000635896 61 ntBASIC3.24□□□□□ -1.89
RETP07949 AL590396.2-201ENST00000636511 1041 ntBASIC3.24□□□□□ -1.89
RETP07949 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RETP07949 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.24□□□□□ -1.89
RETP07949 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.23□□□□□ -1.89
RETP07949 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RETP07949 U3.11-201ENST00000364476 212 ntBASIC3.23□□□□□ -1.89
RETP07949 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RETP07949 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.23□□□□□ -1.89
RETP07949 AL158825.1-201ENST00000414735 521 ntBASIC3.23□□□□□ -1.89
RETP07949 AL356968.1-201ENST00000416622 474 ntBASIC3.23□□□□□ -1.89
RETP07949 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.23□□□□□ -1.89
RETP07949 CKS1BP5-201ENST00000434172 273 ntBASIC3.23□□□□□ -1.89
RETP07949 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.23□□□□□ -1.89
RETP07949 RPS26P30-201ENST00000443431 335 ntBASIC3.23□□□□□ -1.89
RETP07949 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.23□□□□□ -1.89
RETP07949 NPM1P13-201ENST00000452663 865 ntBASIC3.23□□□□□ -1.89
RETP07949 HMGN2P13-201ENST00000476476 274 ntBASIC3.23□□□□□ -1.89
RETP07949 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.23□□□□□ -1.89
RETP07949 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.23□□□□□ -1.89
RETP07949 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RETP07949 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RETP07949 GTF3AP2-201ENST00000557014 266 ntBASIC3.23□□□□□ -1.89
RETP07949 MTND4LP25-201ENST00000570218 163 ntBASIC3.23□□□□□ -1.89
RETP07949 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.23□□□□□ -1.89
RETP07949 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.23□□□□□ -1.89
RETP07949 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.23□□□□□ -1.89
RETP07949 ZNF92P2-201ENST00000600543 1059 ntBASIC3.23□□□□□ -1.89
RETP07949 AL109653.1-201ENST00000603091 248 ntBASIC3.23□□□□□ -1.89
RETP07949 NTAN1P1-201ENST00000603150 646 ntBASIC3.23□□□□□ -1.89
RETP07949 AC079610.2-201ENST00000604818 690 ntBASIC3.23□□□□□ -1.89
RETP07949 KATNBL1P5-201ENST00000605015 517 ntBASIC3.23□□□□□ -1.89
RETP07949 AL512506.1-201ENST00000613918 449 ntBASIC3.23□□□□□ -1.89
RETP07949 MIR6864-201ENST00000617935 70 ntBASIC3.23□□□□□ -1.89
RETP07949 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RETP07949 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.23□□□□□ -1.89
RETP07949 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.23□□□□□ -1.89
RETP07949 CR383658.2-201ENST00000547576 1525 ntBASIC3.23□□□□□ -1.89
RETP07949 AL512283.1-201ENST00000606756 1384 ntBASIC3.23□□□□□ -1.89
RETP07949 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RETP07949 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
RETP07949 AC104446.1-201ENST00000613728 1321 ntBASIC3.22□□□□□ -1.89
RETP07949 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RETP07949 AF117829.1-206ENST00000621883 3802 ntBASIC3.22□□□□□ -1.89
RETP07949 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.22□□□□□ -1.89
RETP07949 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
RETP07949 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RETP07949 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
RETP07949 AC000403.1-201ENST00000613696 3585 ntBASIC3.22□□□□□ -1.89
RETP07949 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RETP07949 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
RETP07949 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RETP07949 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.22□□□□□ -1.89
RETP07949 ATP5C1P1-201ENST00000441945 895 ntBASIC3.22□□□□□ -1.89
RETP07949 RPL23AP33-201ENST00000442301 452 ntBASIC3.22□□□□□ -1.89
RETP07949 BX276092.4-201ENST00000452056 248 ntBASIC3.22□□□□□ -1.89
RETP07949 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.22□□□□□ -1.89
RETP07949 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.22□□□□□ -1.89
RETP07949 AL049829.1-201ENST00000465411 156 ntBASIC3.22□□□□□ -1.89
RETP07949 RPL23AP55-201ENST00000498163 452 ntBASIC3.22□□□□□ -1.89
RETP07949 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RETP07949 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.22□□□□□ -1.89
RETP07949 AC010374.2-201ENST00000512933 535 ntBASIC3.22□□□□□ -1.89
RETP07949 AC017037.2-201ENST00000513850 890 ntBASIC3.22□□□□□ -1.89
RETP07949 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
RETP07949 RN7SKP116-201ENST00000516902 319 ntBASIC3.22□□□□□ -1.89
RETP07949 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
RETP07949 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
RETP07949 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
RETP07949 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.22□□□□□ -1.89
RETP07949 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.22□□□□□ -1.89
RETP07949 C1DP5-201ENST00000525775 383 ntBASIC3.22□□□□□ -1.89
RETP07949 AP003049.1-201ENST00000529418 457 ntBASIC3.22□□□□□ -1.89
RETP07949 OSBPL9P3-201ENST00000534523 595 ntBASIC3.22□□□□□ -1.89
RETP07949 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.22□□□□□ -1.89
RETP07949 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms