Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 AL356121.1-201ENST00000442911 156 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 RPL31P11-202ENST00000454082 372 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 VN1R105P-201ENST00000486595 910 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 RPS4XP20-201ENST00000505751 772 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 AC008958.1-201ENST00000511047 682 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 Y_RNA.713-201ENST00000517013 96 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 CBX3P4-201ENST00000538909 354 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 AC091078.2-201ENST00000557145 559 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 AC008962.1-201ENST00000605729 304 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 AC007619.2-201ENST00000605743 379 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 AC005344.1-201ENST00000613391 459 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 AL731566.2-201ENST00000618971 317 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 HSPA8P1-201ENST00000425843 1833 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RCCD1A6NED2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RCCD1A6NED2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
RCCD1A6NED2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RCCD1A6NED2 SMG1P5-202ENST00000529428 4219 ntBASIC6.46□□□□□ -1.37
RCCD1A6NED2 SMG1P2-201ENST00000566127 4221 ntBASIC6.46□□□□□ -1.37
RCCD1A6NED2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.46□□□□□ -1.37
RCCD1A6NED2 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RCCD1A6NED2 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RCCD1A6NED2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RCCD1A6NED2 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RCCD1A6NED2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 RNU6-1266P-201ENST00000362794 105 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RCCD1A6NED2 DNAJC19P7-201ENST00000428811 344 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 AL445305.1-201ENST00000432577 575 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 AC094019.1-201ENST00000434678 472 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 AC000374.1-201ENST00000434698 1745 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 EEF1A1P1-201ENST00000447052 739 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RCCD1A6NED2 Z92846.1-201ENST00000456203 268 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 snoU109.4-201ENST00000458953 143 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 RNU6-953P-201ENST00000459154 107 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 RPL7P49-201ENST00000471402 708 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 RN7SKP82-201ENST00000516786 223 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 AP002392.1-201ENST00000537692 208 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 AC119403.2-201ENST00000590960 598 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.46□□□□□ -1.38
RCCD1A6NED2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RCCD1A6NED2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RCCD1A6NED2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RCCD1A6NED2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
RCCD1A6NED2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RCCD1A6NED2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RCCD1A6NED2 AC068870.1-201ENST00000563737 2455 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RCCD1A6NED2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RCCD1A6NED2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RCCD1A6NED2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RCCD1A6NED2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.45□□□□□ -1.38
RCCD1A6NED2 Z75746.1-201ENST00000440243 2080 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 AC024651.2-201ENST00000562480 2098 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RCCD1A6NED2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RCCD1A6NED2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RCCD1A6NED2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RCCD1A6NED2 snoU2_19.2-201ENST00000363024 80 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 RNU4-44P-201ENST00000363050 141 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 RNU6-700P-201ENST00000391043 107 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 ARSFP1-201ENST00000398758 477 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 AL591034.2-201ENST00000402839 359 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 Y_RNA.592-201ENST00000410274 109 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 RNU6-325P-201ENST00000411132 105 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 RPS21P8-201ENST00000413365 247 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 RPL21P90-201ENST00000415692 466 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.45□□□□□ -1.38
RCCD1A6NED2 BX842559.1-201ENST00000419615 532 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 AC128677.1-201ENST00000436016 442 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.45□□□□□ -1.38
RCCD1A6NED2 SDC4P-201ENST00000453285 601 ntBASIC6.45□□□□□ -1.38
RCCD1A6NED2 RPL23AP40-201ENST00000487630 390 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms