Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 OR4A15-201ENST00000314706 1035 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RNU6-1309P-201ENST00000363305 108 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 Y_RNA.193-201ENST00000363979 102 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RNU6-533P-201ENST00000384144 107 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RNU6-532P-201ENST00000384318 107 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 MIR525-201ENST00000384978 85 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL603908.1-201ENST00000406098 201 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RN7SKP140-201ENST00000411196 284 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RNA5SP498-201ENST00000411342 120 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC245054.2-201ENST00000415639 319 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC104333.2-201ENST00000422630 192 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 MTCYBP8-201ENST00000422855 651 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL953862.1-201ENST00000423016 168 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RPL7P57-201ENST00000423238 740 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RPL35AP12-201ENST00000425362 338 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL589872.1-201ENST00000426602 288 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 HMGB3P12-201ENST00000438745 556 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 Z98949.2-201ENST00000440996 144 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC245028.2-201ENST00000458673 253 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RN7SL283P-201ENST00000489055 303 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 HMGB1P28-201ENST00000507778 552 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RNU6-445P-201ENST00000516949 107 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC107953.1-201ENST00000522216 297 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC018442.3-201ENST00000523025 183 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AP000827.1-201ENST00000527814 258 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 PHBP17-201ENST00000528576 541 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC023050.3-201ENST00000541142 333 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL845331.3-202ENST00000562856 261 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 HMGN1P30-201ENST00000589286 268 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AL355472.4-201ENST00000610233 626 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC083809.1-201ENST00000615051 472 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC009248.2-201ENST00000619826 254 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AP005019.3-201ENST00000620418 560 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 AC040168.1-201ENST00000623594 991 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 CASC19-284ENST00000642142 1868 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 CKAP2P1-201ENST00000555477 2049 ntBASIC4.62□□□□□ -1.67
HS3ST3A1Q9Y663 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 OR5J1P-201ENST00000313544 939 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RNU6-216P-201ENST00000363282 104 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RNU6-1339P-201ENST00000363574 91 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RNA5SP447-201ENST00000363749 119 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 Y_RNA.381-201ENST00000365666 102 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RNU1-39P-201ENST00000383897 165 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RNU6-505P-201ENST00000384427 107 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RNU6-244P-201ENST00000391028 104 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 U3.22-201ENST00000391120 215 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 AP000580.1-201ENST00000404439 358 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RGS17P1-201ENST00000423358 553 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 RPEP3-201ENST00000425462 676 ntBASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.61□□□□□ -1.67
HS3ST3A1Q9Y663 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms