Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPS4XP7-201ENST00000406274 780 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SKP279-201ENST00000411383 298 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AL354868.1-201ENST00000417077 482 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AL669831.1-202ENST00000428504 417 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC008065.1-201ENST00000428525 348 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC097713.2-201ENST00000430199 356 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AL445928.1-201ENST00000435545 222 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 GAPDHP27-201ENST00000447427 1020 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 CYCSP34-201ENST00000458172 304 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 ACA64.4-201ENST00000459070 127 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SL254P-201ENST00000460609 284 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC087385.1-201ENST00000475062 312 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AP000926.1-201ENST00000479573 241 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SL568P-201ENST00000493069 298 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RPL22P13-201ENST00000493291 347 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-352P-201ENST00000516908 107 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC116917.1-201ENST00000520558 305 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC136777.2-201ENST00000522979 358 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC022616.4-201ENST00000522985 181 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC022882.1-201ENST00000532142 501 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 TXNP4-201ENST00000575018 310 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 MIR744-201ENST00000578242 98 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 MIR4701-201ENST00000583094 63 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 SMIM12P1-201ENST00000603004 274 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC019155.1-201ENST00000382242 574 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-306P-201ENST00000384617 107 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 U3.25-201ENST00000391209 220 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AL139039.1-201ENST00000401900 692 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-55P-201ENST00000411092 107 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AL035422.1-201ENST00000414193 397 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC108479.1-201ENST00000431142 427 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 CYCSP43-201ENST00000438233 310 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 NEFMP1-201ENST00000443423 1006 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC084198.1-201ENST00000477747 402 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 RPL31P60-201ENST00000478450 367 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC098818.1-201ENST00000478593 252 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC044810.1-201ENST00000480271 711 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC022215.1-201ENST00000481770 362 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SL284P-201ENST00000498823 275 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 RNA5SP384-201ENST00000516615 116 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 RNA5SP441-201ENST00000516809 88 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 HSBP1P1-201ENST00000555205 166 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 MRPS21P8-201ENST00000569196 235 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AL109918.3-201ENST00000603072 338 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AL606534.2-204ENST00000635008 178 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC097063.1-201ENST00000426714 1797 ntBASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA11Q9Y5H2 AC138907.8-201ENST00000623981 2256 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms