Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
FGD4Q96M96 AC092125.1-201ENST00000562568 1995 ntBASIC5.4□□□□□ -1.55
FGD4Q96M96 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FGD4Q96M96 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FGD4Q96M96 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.4□□□□□ -1.55
FGD4Q96M96 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FGD4Q96M96 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FGD4Q96M96 SAGE4P-201ENST00000442271 3381 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FGD4Q96M96 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.39□□□□□ -1.55
FGD4Q96M96 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FGD4Q96M96 SAMMSON-213ENST00000641336 1521 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AC009229.4-201ENST00000623854 1947 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FGD4Q96M96 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FGD4Q96M96 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FGD4Q96M96 RNU5E-1-201ENST00000362477 120 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 SNORD56.2-201ENST00000363242 71 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 RNU4-1-201ENST00000363925 141 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 Y_RNA.279-201ENST00000364763 95 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 UBBP2-201ENST00000376781 231 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AL359704.1-201ENST00000411586 781 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AC069218.2-201ENST00000411665 344 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AC140479.3-201ENST00000418944 1126 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.39□□□□□ -1.55
FGD4Q96M96 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.39□□□□□ -1.55
FGD4Q96M96 RPL10P17-201ENST00000453852 316 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 RNU1-6P-201ENST00000516290 144 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 RNU6-709P-201ENST00000517257 104 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.39□□□□□ -1.55
FGD4Q96M96 RN7SL652P-201ENST00000577769 300 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 MIR3118-1-201ENST00000581787 76 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.39□□□□□ -1.55
FGD4Q96M96 AC008782.1-201ENST00000603386 430 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AC008966.2-201ENST00000606157 453 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 RNU4-89P-201ENST00000607443 133 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AL359697.1-201ENST00000624879 587 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 OR56B2P-202ENST00000641377 2453 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 NUP58P1-201ENST00000502546 1738 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 AP000756.2-201ENST00000624168 2567 ntBASIC5.39□□□□□ -1.55
FGD4Q96M96 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.39□□□□□ -1.55
FGD4Q96M96 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
FGD4Q96M96 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
FGD4Q96M96 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.38□□□□□ -1.55
FGD4Q96M96 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FGD4Q96M96 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
FGD4Q96M96 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.38□□□□□ -1.55
FGD4Q96M96 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
FGD4Q96M96 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FGD4Q96M96 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.38□□□□□ -1.55
FGD4Q96M96 RNU6-1243P-201ENST00000364028 107 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 Y_RNA.263-201ENST00000364659 114 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 RPS4XP8-201ENST00000402039 771 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AL356421.1-201ENST00000403255 413 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 RNA5SP118-201ENST00000410385 109 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 RPL12P34-201ENST00000424532 479 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AL049734.2-201ENST00000441066 616 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 RNU6-420P-201ENST00000458780 107 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 RPL36AP41-201ENST00000493820 306 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AC083829.1-201ENST00000503756 657 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AC114786.4-201ENST00000508771 728 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 LRRC34P2-201ENST00000514850 553 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 CENPUP1-201ENST00000526649 1202 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AP001781.1-201ENST00000530977 207 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.38□□□□□ -1.55
FGD4Q96M96 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 AC084783.1-201ENST00000565846 910 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 MIR3167-201ENST00000579623 85 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.38□□□□□ -1.55
FGD4Q96M96 SNORA74C-1-201ENST00000580726 201 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.38□□□□□ -1.55
FGD4Q96M96 AC020910.2-201ENST00000603635 610 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AL035413.2-201ENST00000604801 525 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AL121757.2-201ENST00000611223 313 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AC010133.1-201ENST00000615809 842 ntBASIC5.38□□□□□ -1.55
FGD4Q96M96 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FGD4Q96M96 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.38□□□□□ -1.55
FGD4Q96M96 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
FGD4Q96M96 MTND4P23-201ENST00000447723 1363 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms