Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AC092162.1-201ENST00000432828 434 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AC004938.1-201ENST00000438468 308 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AL031667.1-201ENST00000440222 725 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AL049734.2-201ENST00000441066 616 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 RN7SL817P-201ENST00000480777 288 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AC011825.1-201ENST00000484967 388 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AC093278.1-201ENST00000494700 600 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 RNU6-1095P-201ENST00000516148 108 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AL356432.3-201ENST00000568952 465 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 RN7SL652P-201ENST00000577769 300 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 SNORD84-203ENST00000584275 78 ntBASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC144BQ3MJ40 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 RNU6-259P-201ENST00000383999 107 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 RNU11-4P-201ENST00000391149 133 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 ARL4AP5-201ENST00000404372 599 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 RNU6-712P-201ENST00000410558 100 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AC140479.3-201ENST00000418944 1126 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 UQCRBP1-201ENST00000421129 336 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AL162591.2-201ENST00000449634 317 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 GAPDHP17-201ENST00000449858 1001 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AC104763.1-201ENST00000475274 360 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 Y_RNA.719-201ENST00000517156 106 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 HMGN1P28-201ENST00000521340 364 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AC068831.4-201ENST00000556118 109 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AC069061.3-201ENST00000582254 823 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 UBE2L4-201ENST00000587688 464 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 HMGN1P30-201ENST00000589286 268 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 DEFB131E-202ENST00000602581 683 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AL158801.5-201ENST00000623123 465 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 AL391684.1-202ENST00000641293 1636 ntBASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC144BQ3MJ40 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 GNG5P1-201ENST00000255500 204 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AL591848.1-201ENST00000413092 322 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 OR1AA1P-201ENST00000419597 916 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC244098.2-201ENST00000422068 99 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 ARPC3P1-201ENST00000437218 533 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC234775.1-201ENST00000454247 670 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC005008.1-201ENST00000456151 612 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 MTND1P3-201ENST00000484956 952 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC055855.1-201ENST00000489563 579 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 MTND2P33-201ENST00000506452 1031 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC093840.1-201ENST00000511599 336 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 RNU6-709P-201ENST00000517257 104 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 MTCO2P4-201ENST00000517968 247 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AP001781.1-201ENST00000530977 207 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AP003122.4-201ENST00000530980 758 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC018630.1-201ENST00000541376 925 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AL121603.1-201ENST00000553815 142 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms