Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.96□□□□□ -1.3
NUBP1P53384 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 RNU6-1017P-201ENST00000363613 106 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 Y_RNA.172-201ENST00000363765 102 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 CRP-203ENST00000368111 512 ntTSL 3 BASIC6.96□□□□□ -1.3
NUBP1P53384 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.96□□□□□ -1.3
NUBP1P53384 RNU6-142P-201ENST00000384019 107 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 RNU6-1144P-201ENST00000384247 104 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 RNU6-578P-201ENST00000390980 103 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 RNU6-837P-201ENST00000391056 108 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 SNORA40C-201ENST00000391285 128 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 Y_RNA.595-201ENST00000410403 105 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 SAGE2P-201ENST00000420011 2126 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 GSTA6P-201ENST00000424144 582 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 RPL12P12-201ENST00000424633 501 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.96□□□□□ -1.3
NUBP1P53384 FABP5P15-201ENST00000453566 214 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 AF186996.7-201ENST00000492781 209 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 RNA5SP76-201ENST00000516277 87 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 SNORA31.19-201ENST00000517079 126 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 AC022790.1-201ENST00000522872 204 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 CARD18-203ENST00000532895 422 ntTSL 2 BASIC6.96□□□□□ -1.3
NUBP1P53384 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.96□□□□□ -1.3
NUBP1P53384 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
NUBP1P53384 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.96□□□□□ -1.3
NUBP1P53384 AC008521.2-201ENST00000591021 259 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.96□□□□□ -1.3
NUBP1P53384 AC069307.1-201ENST00000602820 447 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 AC027309.3-201ENST00000623419 351 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
NUBP1P53384 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 AC099654.2-201ENST00000433031 1980 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 AC132219.2-201ENST00000624416 2327 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
NUBP1P53384 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 AC090132.1-201ENST00000524071 1480 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 MAPK10-319ENST00000641459 2542 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 RACGAP1P-201ENST00000550663 1879 ntBASIC6.96□□□□□ -1.3
NUBP1P53384 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUBP1P53384 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
NUBP1P53384 AC069222.1-201ENST00000608028 3360 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 AC022164.1-201ENST00000568767 2673 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC6.95□□□□□ -1.3
NUBP1P53384 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
NUBP1P53384 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC6.95□□□□□ -1.3
NUBP1P53384 CTAGE3P-201ENST00000454280 2404 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 U3.7-201ENST00000363668 216 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 SNORD37.2-201ENST00000391075 66 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 RNU6-1055P-201ENST00000391085 107 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 RN7SL160P-201ENST00000468558 284 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
NUBP1P53384 LSM3P4-201ENST00000502948 309 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 FCF1P8-201ENST00000510322 597 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 TOMM22P4-201ENST00000511318 336 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC6.95□□□□□ -1.3
NUBP1P53384 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.95□□□□□ -1.3
NUBP1P53384 MIR3145-201ENST00000580727 82 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.95□□□□□ -1.3
NUBP1P53384 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 AC048347.1-201ENST00000624621 427 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 SCARNA4-202ENST00000625402 129 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC6.95□□□□□ -1.3
NUBP1P53384 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.95□□□□□ -1.3
NUBP1P53384 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
NUBP1P53384 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
NUBP1P53384 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.95□□□□□ -1.3
NUBP1P53384 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUBP1P53384 AC007390.2-201ENST00000606229 3803 ntBASIC6.95□□□□□ -1.3
NUBP1P53384 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
NUBP1P53384 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
NUBP1P53384 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.94□□□□□ -1.3
NUBP1P53384 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUBP1P53384 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NUBP1P53384 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NUBP1P53384 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms