Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.228-201ENST00000364346 98 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AL024474.1-201ENST00000404655 591 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC079809.1-201ENST00000415468 276 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RAD23BP2-201ENST00000416003 1207 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC090525.1-201ENST00000479116 478 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC025554.1-201ENST00000505641 188 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC135628.1-201ENST00000568867 534 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC073348.1-201ENST00000623002 331 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 MTND5P6-201ENST00000422338 1798 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RN7SKP32-201ENST00000410167 303 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RNU4-64P-201ENST00000410795 131 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 BTF3P4-201ENST00000418852 495 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Z99127.2-201ENST00000441426 334 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC118282.1-201ENST00000506408 765 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 snoZ278.1-201ENST00000517059 112 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 BX248123.2-201ENST00000606318 124 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC022709.1-201ENST00000615967 87 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC244205.2-202ENST00000635781 342 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC104623.2-202ENST00000623477 4002 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC126323.6-202ENST00000568092 3511 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AL049641.1-201ENST00000441055 1948 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RNU6-392P-201ENST00000364926 101 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.413-201ENST00000384007 102 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.754-201ENST00000476024 102 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 BNIP3P7-201ENST00000605641 516 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.790-201ENST00000614282 102 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.782-201ENST00000614695 102 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC092809.1-201ENST00000441469 474 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC093663.2-201ENST00000484625 313 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AL359219.2-201ENST00000555184 348 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AL133457.1-201ENST00000564251 987 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC096644.4-201ENST00000563417 2912 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.204-201ENST00000364112 102 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RNY4P7-201ENST00000364600 96 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RNU1-57P-201ENST00000384491 166 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AC010928.3-201ENST00000587712 541 ntBASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AL356057.3-201ENST00000402607 340 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC007423.1-201ENST00000605009 627 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms