Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 OR7E25P-202ENST00000641088 5937 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 RNU6-527P-201ENST00000363425 104 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 Y_RNA.601-201ENST00000410500 113 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 Y_RNA.611-201ENST00000410682 108 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 RPLP0P1-201ENST00000457002 361 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 RN7SL751P-201ENST00000473281 284 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 AC012158.1-204ENST00000483430 465 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 RPL31P13-201ENST00000484151 370 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 AC078817.1-201ENST00000492623 435 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 GLUD1P3-202ENST00000508551 200 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 RNU6-1006P-201ENST00000516998 103 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 AC243725.1-201ENST00000637164 436 ntBASIC7.94□□□□□ -1.14
RNF39Q9H2S5 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF39Q9H2S5 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 GUCY1B2-204ENST00000531898 1979 ntBASIC7.93□□□□□ -1.14
RNF39Q9H2S5 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.93□□□□□ -1.14
RNF39Q9H2S5 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 Y_RNA.243-201ENST00000364481 109 ntBASIC7.93□□□□□ -1.14
RNF39Q9H2S5 MIR624-201ENST00000385217 97 ntBASIC7.93□□□□□ -1.14
RNF39Q9H2S5 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 AC091564.4-201ENST00000533934 2194 ntBASIC7.93□□□□□ -1.14
RNF39Q9H2S5 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
RNF39Q9H2S5 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 RNA5SP429-201ENST00000363688 109 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 Y_RNA.366-201ENST00000365540 102 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 MIR759-201ENST00000390224 91 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 CYB5AP4-201ENST00000396692 399 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 SNORA36B-201ENST00000410438 131 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 Y_RNA.607-201ENST00000410597 98 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 RNA5SP127-201ENST00000411051 133 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 RN7SKP137-201ENST00000411074 307 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 EIF4EP4-201ENST00000424916 578 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 AC009414.1-201ENST00000427200 443 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 SLAMF6P1-201ENST00000451067 602 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 snoU13.7-201ENST00000459220 104 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 AC018638.3-201ENST00000461273 132 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms