Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 Y_RNA.202-201ENST00000364083 110 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-1160P-201ENST00000384546 104 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 RNA5SP113-201ENST00000410486 84 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC048351.1-201ENST00000420064 602 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AL645937.1-202ENST00000421799 937 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 MTCYBP8-201ENST00000422855 651 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 RPL19P16-201ENST00000433839 588 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 SNORD19B-201ENST00000459623 84 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 MTND4P17-201ENST00000470444 350 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC083829.1-201ENST00000503756 657 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 TMEM248P1-201ENST00000510579 951 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-1314P-201ENST00000517139 104 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC022616.3-201ENST00000523940 148 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AL355836.1-201ENST00000555951 870 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC026464.5-201ENST00000562497 722 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC098848.2-201ENST00000588023 330 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNGAP1Q96PV0 RNY4P16-201ENST00000364768 94 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-225P-201ENST00000384613 103 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 MIR134-201ENST00000385258 73 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 HMGB3P7-201ENST00000400214 611 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AL356276.2-201ENST00000435919 558 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 IGHV5-78-201ENST00000450948 295 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 CACYBPP2-201ENST00000453625 678 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 HMGB1P4-201ENST00000455362 567 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 RN7SL443P-201ENST00000464331 290 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AL049874.2-201ENST00000492636 288 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AC010350.1-201ENST00000504908 231 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AP006289.1-201ENST00000538089 277 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AC124312.5-201ENST00000604451 268 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 CASC19-204ENST00000641001 2055 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 PROS2P-201ENST00000474651 1951 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 RNA5SP515-201ENST00000364570 118 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-169P-201ENST00000365336 107 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-474P-201ENST00000384243 107 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-1148P-201ENST00000410992 104 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms