Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC092125.1-201ENST00000562568 1995 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 NXPH1-205ENST00000602349 1953 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 ELF2P3-201ENST00000445099 1506 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 Y_RNA.46-201ENST00000362695 102 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 U8.3-201ENST00000363321 132 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 RNU6-730P-201ENST00000383954 104 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 RPL7P25-201ENST00000404151 721 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 SNORA74C-2-201ENST00000411179 201 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 DPPA2P1-201ENST00000428060 556 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 TIMM9P3-201ENST00000428659 274 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 RPL23AP1-201ENST00000428990 471 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 FCF1P1-201ENST00000432690 571 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC127537.2-201ENST00000439258 465 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 CBX1P1-201ENST00000440184 427 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 PTMAP3-201ENST00000447474 330 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 MTCO3P20-201ENST00000454926 688 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC053481.1-201ENST00000467217 306 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 RN7SL817P-201ENST00000480777 288 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 DEFB109F-201ENST00000491870 277 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AK3P4-201ENST00000504283 583 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC108078.1-201ENST00000508073 725 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 RNU6-718P-201ENST00000516166 105 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 HIGD1AP5-201ENST00000529959 259 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 PDCD5P1-201ENST00000543528 309 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 SETP2-201ENST00000553886 926 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL355812.1-201ENST00000603215 216 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL161734.1-201ENST00000609720 557 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL596245.1-201ENST00000618994 362 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AL023881.1-201ENST00000621088 301 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC068880.5-201ENST00000624331 290 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 MAPK10-303ENST00000641324 3959 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 ASNSP1-201ENST00000518311 1939 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC093535.2-201ENST00000624769 2326 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 AC091046.3-201ENST00000631455 1574 ntBASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CTHRC1Q96CG8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RAD17P1-201ENST00000418130 2042 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 ZNF734P-201ENST00000419494 1534 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms