Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL138478.1-201ENST00000612252 832 ntBASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 AL162274.2-201ENST00000614406 332 ntBASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 CYCSP41-201ENST00000616920 296 ntBASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 AC026422.1-201ENST00000623961 452 ntBASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 AC127502.3-201ENST00000636170 1206 ntBASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 AC018529.3-201ENST00000624212 2254 ntBASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM4Q9ULL8 AC006504.1-201ENST00000562493 3666 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 AC000123.3-201ENST00000624029 4975 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 AL355578.1-201ENST00000607405 1328 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 Z83843.1-201ENST00000604070 3685 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 RNA5SP42-201ENST00000364278 115 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 U3.15-201ENST00000365398 212 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 SNORD116-12-201ENST00000384468 92 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 RNU6-1300P-201ENST00000391046 108 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 MIR1250-201ENST00000408098 113 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 RPL31P2-201ENST00000413849 377 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 RPL21P109-201ENST00000422213 475 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 BTF3L4P4-201ENST00000506381 449 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 HNRNPKP5-201ENST00000515300 253 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 RNU6-885P-201ENST00000516607 104 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 RPL12P22-201ENST00000519073 490 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 LSM6P2-201ENST00000552208 177 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 YWHAQP7-201ENST00000603536 658 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 MIR7106-201ENST00000612419 65 ntBASIC6.56□□□□□ -1.36
SHROOM4Q9ULL8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 S100A11P1-201ENST00000477525 312 ntBASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 MTCYBP27-201ENST00000555160 670 ntBASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 RPP40P2-201ENST00000603596 712 ntBASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 MIR6715A-201ENST00000615929 79 ntBASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM4Q9ULL8 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 RNU6-1226P-201ENST00000384317 107 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 Z75741.2-201ENST00000417272 1167 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 OR2X1P-201ENST00000421144 687 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 SEPT7P5-201ENST00000434048 306 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 RPS29P31-201ENST00000446147 164 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 AC022795.1-201ENST00000473808 480 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 AC026634.1-201ENST00000634369 198 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 DCAF13P1-201ENST00000495256 1330 ntBASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
SHROOM4Q9ULL8 AC063979.1-201ENST00000415539 377 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 AC005345.1-201ENST00000431868 217 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 AC025750.2-201ENST00000442609 450 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 PNPLA4P1-201ENST00000458328 305 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 KLRA1P-201ENST00000503499 986 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 AC008489.1-201ENST00000524271 483 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 RNA5SP108-201ENST00000605921 117 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 Z99496.1-201ENST00000469424 1477 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 RNU6-707P-201ENST00000364647 95 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 FCF1P2-201ENST00000415284 583 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 DUXAP8-207ENST00000456786 622 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms