Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL590392.1-201ENST00000604960 446 ntBASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 AL136363.1-201ENST00000605349 337 ntBASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
BCAS3Q9H6U6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AC000374.1-201ENST00000434698 1745 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 CKAP2P1-201ENST00000555477 2049 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 ERCC6-202ENST00000374127 1782 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 CCT4P2-201ENST00000233836 1548 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AC005005.4-201ENST00000623789 16698 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 SNORD81.2-201ENST00000365153 76 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 RNU6-657P-201ENST00000383904 107 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 RPS4XP8-201ENST00000402039 771 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 RPS20P2-201ENST00000402520 389 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 RPS3AP54-201ENST00000435535 734 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 TAAR7P-201ENST00000436141 242 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 HMGB3P12-201ENST00000438745 556 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 SEPT14P3-201ENST00000439401 183 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AL732372.2-207ENST00000445840 183 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 SEPT14P2-201ENST00000453405 183 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 NIPA2P2-201ENST00000496376 1083 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 SEPT14P4-201ENST00000513445 186 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 RNU6-488P-201ENST00000515918 99 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 RNU6-835P-201ENST00000516974 104 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 FO082796.1-201ENST00000523795 183 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AL109766.1-201ENST00000555080 552 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 ATP5J2P6-201ENST00000565203 266 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AC015917.1-201ENST00000579654 510 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AC017100.2-201ENST00000584628 355 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AP000942.4-201ENST00000604811 241 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AL356218.2-201ENST00000605264 187 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AC241377.1-201ENST00000619797 406 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AC011944.2-201ENST00000624440 683 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 AL031119.1-201ENST00000404707 1879 ntBASIC5.2□□□□□ -1.58
BCAS3Q9H6U6 CDC27P2-201ENST00000425026 1922 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 ZNF137P-201ENST00000456718 1920 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 RNU6-282P-201ENST00000365357 103 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AL592291.1-201ENST00000403830 352 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 RNU4-25P-201ENST00000410569 230 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 GTF2IP20-201ENST00000431663 360 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 HMGN3P1-201ENST00000453847 193 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 RPS15AP1-201ENST00000457423 391 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AC090142.1-201ENST00000465776 462 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 RPS15AP17-201ENST00000470598 390 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 FAM172BP-201ENST00000487497 1089 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms