Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 RNU1-18P-201ENST00000363062 164 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 Y_RNA.110-201ENST00000363220 99 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 MIR199A2-201ENST00000385289 110 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 PTMAP2-201ENST00000397627 327 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 U3.42-201ENST00000408746 214 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 RNA5SP38-201ENST00000410750 119 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 SSXP9-201ENST00000417503 292 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AC027644.1-201ENST00000419595 298 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AL137014.1-201ENST00000420490 1226 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 MTCO1P39-201ENST00000426148 480 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AL591419.1-201ENST00000427423 339 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AC018644.1-201ENST00000429934 551 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AC004866.2-201ENST00000438285 481 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 TRIM60P18-201ENST00000441518 828 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 SETD6P1-201ENST00000444575 317 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 RFC5P1-201ENST00000454419 874 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 RPL30P14-201ENST00000482744 348 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 RPL21P129-201ENST00000491732 478 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 RPL31P61-201ENST00000496160 376 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AC053481.3-201ENST00000577881 843 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 RPL23AP92-201ENST00000603609 255 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 MIR6076-201ENST00000617521 113 ntBASIC3.53□□□□□ -1.84
HPF1Q9NWY4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HPF1Q9NWY4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AL136520.1-201ENST00000600311 1322 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 RNU6-878P-201ENST00000384578 110 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 RPS4XP3-201ENST00000398541 413 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 Z74696.2-201ENST00000436514 498 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 TXNP1-201ENST00000441872 371 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AL133547.1-201ENST00000448546 220 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 HMGB3P8-201ENST00000449709 577 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 MRPL42P4-201ENST00000453267 443 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 RN7SL93P-201ENST00000463035 293 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC004801.2-202ENST00000463559 283 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 ACTR3P3-201ENST00000480448 893 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AP002812.1-201ENST00000495378 474 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC108941.1-201ENST00000502853 530 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 CBX3P3-201ENST00000508108 532 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 HMGN1P11-201ENST00000508668 303 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC026726.1-201ENST00000512859 601 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC027309.2-201ENST00000520566 192 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC093331.1-201ENST00000521474 169 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC005951.1-201ENST00000576706 485 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC091946.2-201ENST00000606105 291 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC008759.3-201ENST00000613300 508 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC006133.1-201ENST00000617106 264 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 CR392039.5-201ENST00000623201 510 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 IPO8P1-201ENST00000455509 3109 ntBASIC3.52□□□□□ -1.85
HPF1Q9NWY4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HPF1Q9NWY4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms