Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX18Q96RF0 AC124068.1-201ENST00000563131 678 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 UBE2FP2-201ENST00000566646 462 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 MIR5699-201ENST00000578903 90 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 AC090312.1-201ENST00000580637 348 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX18Q96RF0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX18Q96RF0 ELOCP28-201ENST00000590044 317 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX18Q96RF0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX18Q96RF0 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 AL357078.3-201ENST00000607528 618 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 AC007497.1-201ENST00000610421 561 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 AC007014.2-201ENST00000615581 479 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 CYP3A51P-201ENST00000633513 256 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 AC110994.2-201ENST00000635481 492 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX18Q96RF0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SNX18Q96RF0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX18Q96RF0 AC007529.1-201ENST00000418574 2178 ntBASIC4.27□□□□□ -1.73
SNX18Q96RF0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX18Q96RF0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SNX18Q96RF0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX18Q96RF0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC097504.1-201ENST00000515103 2415 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC074029.4-201ENST00000624796 1859 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AP002001.2-201ENST00000529025 1469 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AL590762.2-201ENST00000395798 571 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 Y_RNA.608-201ENST00000410647 95 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 DPPA2P1-201ENST00000428060 556 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 RSU1P2-202ENST00000437884 485 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 H2AFZP6-201ENST00000444403 394 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC002381.1-201ENST00000447049 280 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 GAPDHP17-201ENST00000449858 1001 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 USP9YP34-201ENST00000453983 808 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 PLGLA-201ENST00000465668 449 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 RPS29P22-201ENST00000472363 168 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 HMGB1P36-201ENST00000487709 576 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 GAPDHP56-201ENST00000506031 988 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 BTF3P13-201ENST00000513224 490 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 RNU1-6P-201ENST00000516290 144 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC021006.3-201ENST00000530771 192 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC008033.2-201ENST00000542626 177 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX18Q96RF0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 TPMTP1-201ENST00000592307 737 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC091304.9-201ENST00000612091 226 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AL356321.1-201ENST00000621360 228 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX18Q96RF0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX18Q96RF0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX18Q96RF0 MAPK10-263ENST00000641052 4307 ntBASIC4.26□□□□□ -1.73
SNX18Q96RF0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SNX18Q96RF0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX18Q96RF0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX18Q96RF0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 A2MP1-204ENST00000566278 4130 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AL451142.2-201ENST00000429076 2090 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 RNY4P34-201ENST00000364779 95 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 Y_RNA.296-201ENST00000364930 108 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 SNORA56-201ENST00000383966 129 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX18Q96RF0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms