RNA–Protein interactions for RNA: ENST00000625219.1

AC109471.3-201, humanhuman

TSL 5 BASIC

Gene AC109471.3, Length 233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109471.3-201ENST00000625219 AEBP2Q6ZN18 517 aaPredicted RBP30.15■■■□□ 2.42
AC109471.3-201ENST00000625219 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
AC109471.3-201ENST00000625219 SENP3Q9H4L4 574 aaPredicted RBP25.83■■□□□ 1.73
AC109471.3-201ENST00000625219 PHF23Q9BUL5 403 aaPredicted RBP25.44■■□□□ 1.66
AC109471.3-201ENST00000625219 FOXD1Q16676 465 aa24.09■■□□□ 1.45
AC109471.3-201ENST00000625219 POTEDQ86YR6 584 aa22.74■■□□□ 1.23
AC109471.3-201ENST00000625219 MSH5O43196 834 aa22.71■■□□□ 1.23
AC109471.3-201ENST00000625219 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
AC109471.3-201ENST00000625219 PIAS4Q8N2W9 510 aaPredicted RBP22.44■■□□□ 1.18
AC109471.3-201ENST00000625219 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
AC109471.3-201ENST00000625219 ADRA2BP18089 450 aa22.17■■□□□ 1.14
AC109471.3-201ENST00000625219 MAPK8IP2Q13387 824 aaPredicted RBP20.47■□□□□ 0.87
AC109471.3-201ENST00000625219 DMRT2Q9Y5R5 561 aa20.41■□□□□ 0.86
AC109471.3-201ENST00000625219 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
AC109471.3-201ENST00000625219 CACNB1Q02641 598 aaPredicted RBP19.72■□□□□ 0.75
AC109471.3-201ENST00000625219 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
AC109471.3-201ENST00000625219 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
AC109471.3-201ENST00000625219 HOXD11P31277 338 aaPredicted RBP19.52■□□□□ 0.72
AC109471.3-201ENST00000625219 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
AC109471.3-201ENST00000625219 RNF39Q9H2S5 420 aa19.33■□□□□ 0.68
AC109471.3-201ENST00000625219 RNF216Q9NWF9 866 aaPredicted RBP19.29■□□□□ 0.68
AC109471.3-201ENST00000625219 C1QBPQ07021 282 aaKnown RBP19.06■□□□□ 0.64
AC109471.3-201ENST00000625219 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
AC109471.3-201ENST00000625219 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
AC109471.3-201ENST00000625219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
AC109471.3-201ENST00000625219 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
AC109471.3-201ENST00000625219 U3KPZ7 1027 aaPredicted RBP18.15■□□□□ 0.5
AC109471.3-201ENST00000625219 CAPN15O75808 1086 aa18.03■□□□□ 0.48
AC109471.3-201ENST00000625219 SPINK5Q9NQ38 1064 aaPredicted RBP18.01■□□□□ 0.47
AC109471.3-201ENST00000625219 DSG3P32926 999 aa17.98■□□□□ 0.47
AC109471.3-201ENST00000625219 KCNA4P22459 653 aa17.84■□□□□ 0.45
AC109471.3-201ENST00000625219 POTEHQ6S545 545 aa17.77■□□□□ 0.44
AC109471.3-201ENST00000625219 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
AC109471.3-201ENST00000625219 APLP2Q06481 763 aa17.68■□□□□ 0.42
AC109471.3-201ENST00000625219 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
AC109471.3-201ENST00000625219 ZNF219Q9P2Y4 722 aaPredicted RBP17.61■□□□□ 0.41
AC109471.3-201ENST00000625219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
AC109471.3-201ENST00000625219 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
AC109471.3-201ENST00000625219 ABCB7O75027 752 aa17.55■□□□□ 0.4
AC109471.3-201ENST00000625219 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
AC109471.3-201ENST00000625219 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
AC109471.3-201ENST00000625219 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
AC109471.3-201ENST00000625219 POLA2Q14181 598 aa17.1■□□□□ 0.33
AC109471.3-201ENST00000625219 CHRDL2Q6WN34 429 aa16.95■□□□□ 0.3
AC109471.3-201ENST00000625219 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
AC109471.3-201ENST00000625219 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
AC109471.3-201ENST00000625219 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
AC109471.3-201ENST00000625219 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
AC109471.3-201ENST00000625219 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
AC109471.3-201ENST00000625219 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
AC109471.3-201ENST00000625219 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
AC109471.3-201ENST00000625219 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
AC109471.3-201ENST00000625219 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
AC109471.3-201ENST00000625219 ZBTB22O15209 634 aa16.37■□□□□ 0.21
AC109471.3-201ENST00000625219 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
AC109471.3-201ENST00000625219 ATXN8OSP0DMR3 200 aa16.32■□□□□ 0.2
AC109471.3-201ENST00000625219 FXR2P51116 673 aaKnown RBP eCLIP16.3■□□□□ 0.2
AC109471.3-201ENST00000625219 HAX1O00165 279 aa16.29■□□□□ 0.2
AC109471.3-201ENST00000625219 SPDYE2BA6NHP3 402 aa16.19■□□□□ 0.18
AC109471.3-201ENST00000625219 SPDYE6P0CI01 402 aa16.19■□□□□ 0.18
AC109471.3-201ENST00000625219 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
AC109471.3-201ENST00000625219 FBLN2P98095 1184 aa16.18■□□□□ 0.18
AC109471.3-201ENST00000625219 EVX2Q03828 476 aa16.01■□□□□ 0.15
AC109471.3-201ENST00000625219 SPDYE1Q8NFV5 336 aaPredicted RBP16■□□□□ 0.15
AC109471.3-201ENST00000625219 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
AC109471.3-201ENST00000625219 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
AC109471.3-201ENST00000625219 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
AC109471.3-201ENST00000625219 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
AC109471.3-201ENST00000625219 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
AC109471.3-201ENST00000625219 C19orf67A6NJJ6 358 aa15.79■□□□□ 0.12
AC109471.3-201ENST00000625219 CHADLQ6NUI6 762 aa15.69■□□□□ 0.1
AC109471.3-201ENST00000625219 PRR29P0C7W0 189 aa15.68■□□□□ 0.1
AC109471.3-201ENST00000625219 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
AC109471.3-201ENST00000625219 GABBR2O75899 941 aa15.66■□□□□ 0.1
AC109471.3-201ENST00000625219 LHX8Q68G74 356 aa15.48■□□□□ 0.07
AC109471.3-201ENST00000625219 FARP1Q9Y4F1 1045 aaPredicted RBP15.44■□□□□ 0.06
AC109471.3-201ENST00000625219 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
AC109471.3-201ENST00000625219 CLCN6P51797 869 aa15.34■□□□□ 0.05
AC109471.3-201ENST00000625219 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
AC109471.3-201ENST00000625219 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
AC109471.3-201ENST00000625219 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
AC109471.3-201ENST00000625219 DCBLD2Q96PD2 775 aa15.19■□□□□ 0.02
AC109471.3-201ENST00000625219 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
AC109471.3-201ENST00000625219 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
AC109471.3-201ENST00000625219 CREBZFQ9NS37 354 aa15.16■□□□□ 0.02
AC109471.3-201ENST00000625219 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
AC109471.3-201ENST00000625219 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
AC109471.3-201ENST00000625219 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
AC109471.3-201ENST00000625219 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
AC109471.3-201ENST00000625219 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
AC109471.3-201ENST00000625219 PHF12Q96QT6 1004 aa14.89□□□□□ -0.03
AC109471.3-201ENST00000625219 MNX1P50219 401 aaPredicted RBP14.85□□□□□ -0.03
AC109471.3-201ENST00000625219 OTUD5Q96G74 571 aa14.81□□□□□ -0.04
AC109471.3-201ENST00000625219 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
AC109471.3-201ENST00000625219 PLSCR2Q9NRY7 297 aa14.77□□□□□ -0.05
AC109471.3-201ENST00000625219 PELP1Q8IZL8 1130 aaKnown RBP14.73□□□□□ -0.05
AC109471.3-201ENST00000625219 MS4A3Q96HJ5 214 aa14.69□□□□□ -0.06
AC109471.3-201ENST00000625219 ASTLQ6HA08 431 aaPredicted RBP14.67□□□□□ -0.06
AC109471.3-201ENST00000625219 METRNQ9UJH8 293 aa14.64□□□□□ -0.07
AC109471.3-201ENST00000625219 ATMINO43313 823 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms