Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 RN7SKP151-201ENST00000410230 316 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 RSL24D1P6-201ENST00000426934 401 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC096775.1-201ENST00000437724 448 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC245291.3-201ENST00000443400 292 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 NOTCH2P1-201ENST00000443481 624 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 CYCSP34-201ENST00000458172 304 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-953P-201ENST00000459154 107 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC087884.1-201ENST00000469738 328 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC092451.1-201ENST00000480211 153 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 RN7SL283P-201ENST00000489055 303 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC015524.1-201ENST00000491585 472 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-390P-201ENST00000516259 103 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-1271P-201ENST00000517049 105 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC009120.3-201ENST00000563335 499 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 RN7SL208P-201ENST00000577964 296 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC067852.4-201ENST00000590314 478 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AL161423.1-201ENST00000613700 262 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 AL732372.2-225ENST00000642124 456 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.84□□□□□ -1.48
DEPDC4Q8N2C3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
DEPDC4Q8N2C3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 RNA5SP308-201ENST00000362532 115 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 Y_RNA.153-201ENST00000363615 91 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 Y_RNA.480-201ENST00000384364 102 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 SNORA41-201ENST00000384675 132 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 OR6E1P-201ENST00000414424 923 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC080125.1-201ENST00000414888 684 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 MRPS21P5-201ENST00000417885 231 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC090774.1-201ENST00000435925 246 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC004866.2-201ENST00000438285 481 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AL121578.2-201ENST00000448797 447 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC245028.2-201ENST00000458673 253 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AL035690.1-201ENST00000490892 383 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC110794.1-201ENST00000505816 425 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC011494.1-201ENST00000596454 237 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AL360012.1-201ENST00000602813 131 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 IGHV3-29-201ENST00000604817 344 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AL121612.2-201ENST00000612261 482 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AL512652.1-201ENST00000619006 500 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AC026951.1-201ENST00000559530 2459 ntBASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
DEPDC4Q8N2C3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC093671.1-201ENST00000624981 2929 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms