Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
NUBP1P53384 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUBP1P53384 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUBP1P53384 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUBP1P53384 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC7.03□□□□□ -1.28
NUBP1P53384 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUBP1P53384 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUBP1P53384 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUBP1P53384 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
NUBP1P53384 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.03□□□□□ -1.28
NUBP1P53384 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.02□□□□□ -1.28
NUBP1P53384 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.02□□□□□ -1.28
NUBP1P53384 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
NUBP1P53384 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
NUBP1P53384 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
NUBP1P53384 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
NUBP1P53384 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
NUBP1P53384 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC7.02□□□□□ -1.29
NUBP1P53384 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.02□□□□□ -1.29
NUBP1P53384 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 AL365440.1-201ENST00000436135 2167 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.02□□□□□ -1.29
NUBP1P53384 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.02□□□□□ -1.29
NUBP1P53384 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC7.02□□□□□ -1.29
NUBP1P53384 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
NUBP1P53384 RN7SKP69-201ENST00000365390 305 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 MIR10B-201ENST00000385011 110 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 MIR329-1-201ENST00000385028 80 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.02□□□□□ -1.29
NUBP1P53384 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.02□□□□□ -1.29
NUBP1P53384 RPL7AP25-201ENST00000423357 805 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 CHEK2P5-201ENST00000423877 246 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.02□□□□□ -1.29
NUBP1P53384 Z82210.1-201ENST00000440037 231 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 RN7SL706P-201ENST00000460079 292 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 DUTP1-201ENST00000493631 470 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 RNU6-1198P-201ENST00000516904 67 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 IGLVV-66-201ENST00000523818 341 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.02□□□□□ -1.29
NUBP1P53384 AC051619.2-201ENST00000559063 397 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 ACTG1P15-201ENST00000570019 1063 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 MIR4782-201ENST00000577987 79 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 MIR3614-201ENST00000581261 86 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 AC005224.3-201ENST00000584683 2140 ntBASIC7.02□□□□□ -1.29
NUBP1P53384 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NUBP1P53384 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
NUBP1P53384 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUBP1P53384 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
NUBP1P53384 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
NUBP1P53384 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.01□□□□□ -1.29
NUBP1P53384 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NUBP1P53384 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 RNA5SP140-201ENST00000364524 92 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 Y_RNA.319-201ENST00000365138 92 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 RNU6-429P-201ENST00000384582 108 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 OR3A2-201ENST00000408891 1076 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 CTSL3P-202ENST00000412179 788 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.01□□□□□ -1.29
NUBP1P53384 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.01□□□□□ -1.29
NUBP1P53384 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.01□□□□□ -1.29
NUBP1P53384 RPL7AP61-201ENST00000443410 636 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.01□□□□□ -1.29
NUBP1P53384 RPL10P17-201ENST00000453852 316 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 NXT1P1-201ENST00000458481 316 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 AL121594.1-201ENST00000475906 575 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 HSPE1P6-201ENST00000479457 291 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 RN7SL797P-201ENST00000486314 297 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 Y_RNA.709-201ENST00000516952 92 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 ULK4P1-202ENST00000565174 503 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.01□□□□□ -1.29
NUBP1P53384 AL138963.2-201ENST00000605137 226 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 AL589743.6-201ENST00000611025 117 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 AC004241.2-201ENST00000614562 444 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 U73479.1-201ENST00000618062 168 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 AC074140.1-201ENST00000621617 208 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.01□□□□□ -1.29
NUBP1P53384 AC079776.5-201ENST00000641920 211 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUBP1P53384 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.01□□□□□ -1.29
NUBP1P53384 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms