Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ARL2BPP4-201ENST00000506854 471 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNGA1P29973 RNU6-27P-201ENST00000516146 107 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 RN7SKP116-201ENST00000516902 319 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.2□□□□□ -1.58
CNGA1P29973 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.2□□□□□ -1.58
CNGA1P29973 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.2□□□□□ -1.58
CNGA1P29973 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.2□□□□□ -1.58
CNGA1P29973 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.2□□□□□ -1.58
CNGA1P29973 AC090615.1-201ENST00000577519 154 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 RN7SL176P-201ENST00000580352 264 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 AL669831.4-202ENST00000590817 238 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 AC022916.3-201ENST00000592961 742 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 AC006329.2-201ENST00000611491 394 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.2□□□□□ -1.58
CNGA1P29973 CRYM-AS1-204ENST00000637983 556 ntBASIC5.2□□□□□ -1.58
CNGA1P29973 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.2□□□□□ -1.58
CNGA1P29973 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNGA1P29973 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNGA1P29973 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.2□□□□□ -1.58
CNGA1P29973 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.2□□□□□ -1.58
CNGA1P29973 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.2□□□□□ -1.58
CNGA1P29973 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.19□□□□□ -1.58
CNGA1P29973 RN7SKP56-201ENST00000410513 331 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 AL663109.1-201ENST00000411498 844 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.19□□□□□ -1.58
CNGA1P29973 AC007899.1-201ENST00000412776 775 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 RPL36AP36-201ENST00000418616 301 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 RPL7P57-201ENST00000423238 740 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.19□□□□□ -1.58
CNGA1P29973 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNGA1P29973 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNGA1P29973 AC091862.1-201ENST00000438016 1100 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.19□□□□□ -1.58
CNGA1P29973 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.19□□□□□ -1.58
CNGA1P29973 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.19□□□□□ -1.58
CNGA1P29973 CFTRP1-201ENST00000456646 183 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 SCARNA10-201ENST00000459255 330 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 UQCRHP4-201ENST00000471686 272 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 AC034222.1-201ENST00000494052 532 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.19□□□□□ -1.58
CNGA1P29973 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.19□□□□□ -1.58
CNGA1P29973 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CNGA1P29973 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CNGA1P29973 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.19□□□□□ -1.58
CNGA1P29973 AF131216.2-201ENST00000512316 564 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.19□□□□□ -1.58
CNGA1P29973 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.19□□□□□ -1.58
CNGA1P29973 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.19□□□□□ -1.58
CNGA1P29973 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
CNGA1P29973 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.19□□□□□ -1.58
CNGA1P29973 AC025884.1-201ENST00000556034 378 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.19□□□□□ -1.58
CNGA1P29973 HMGB2P1-201ENST00000591146 634 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.19□□□□□ -1.58
CNGA1P29973 SNORD91B-202ENST00000608459 222 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNGA1P29973 AL603839.4-201ENST00000624658 1005 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 AC091925.2-201ENST00000625059 256 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.19□□□□□ -1.58
CNGA1P29973 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNGA1P29973 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.19□□□□□ -1.58
CNGA1P29973 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNGA1P29973 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CNGA1P29973 SALL4P2-201ENST00000423288 2910 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CNGA1P29973 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CNGA1P29973 AC006971.1-201ENST00000407916 4486 ntBASIC5.19□□□□□ -1.58
CNGA1P29973 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.18□□□□□ -1.58
CNGA1P29973 ZFRP1-201ENST00000457579 2970 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNGA1P29973 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNGA1P29973 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.18□□□□□ -1.58
CNGA1P29973 RNY4P24-201ENST00000362735 96 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 RNA5SP258-201ENST00000362750 119 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 Y_RNA.359-201ENST00000365498 102 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 SNORD51-201ENST00000384320 80 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 RNU6-809P-201ENST00000384461 107 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 RPL32P23-201ENST00000397237 405 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 AL445189.1-201ENST00000405722 338 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 MTCO3P41-201ENST00000414801 328 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 OR8F1P-201ENST00000425243 930 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 AL356583.2-201ENST00000426536 280 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 AC006548.1-201ENST00000427470 102 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 OR4C10P-201ENST00000434991 931 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.18□□□□□ -1.58
CNGA1P29973 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.18□□□□□ -1.58
CNGA1P29973 RPL7P52-201ENST00000449200 742 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 PPIAP3-201ENST00000450588 505 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.18□□□□□ -1.58
CNGA1P29973 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNGA1P29973 RN7SL604P-201ENST00000492589 296 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 PRELID3BP7-201ENST00000503606 469 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.18□□□□□ -1.58
CNGA1P29973 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.18□□□□□ -1.58
CNGA1P29973 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.18□□□□□ -1.58
CNGA1P29973 MTND4LP18-201ENST00000526864 291 ntBASIC5.18□□□□□ -1.58
CNGA1P29973 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms