Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RPL7P25-201ENST00000404151 721 ntBASIC3.06□□□□□ -1.92
VAPBO95292 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VAPBO95292 HSFY1P1-201ENST00000423928 1178 ntBASIC3.06□□□□□ -1.92
VAPBO95292 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.06□□□□□ -1.92
VAPBO95292 XKRY2-201ENST00000442362 1093 ntBASIC3.06□□□□□ -1.92
VAPBO95292 RPS24P6-201ENST00000452670 400 ntBASIC3.06□□□□□ -1.92
VAPBO95292 AC073055.1-201ENST00000456901 1621 ntBASIC3.06□□□□□ -1.92
VAPBO95292 snoU13.24-201ENST00000458998 104 ntBASIC3.06□□□□□ -1.92
VAPBO95292 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.06□□□□□ -1.92
VAPBO95292 RPL21P18-201ENST00000469899 480 ntBASIC3.06□□□□□ -1.92
VAPBO95292 RN7SL601P-201ENST00000471221 293 ntBASIC3.06□□□□□ -1.92
VAPBO95292 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPBO95292 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.06□□□□□ -1.92
VAPBO95292 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.06□□□□□ -1.92
VAPBO95292 MTND4LP22-201ENST00000508209 276 ntBASIC3.06□□□□□ -1.92
VAPBO95292 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPBO95292 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.06□□□□□ -1.92
VAPBO95292 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.06□□□□□ -1.92
VAPBO95292 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.06□□□□□ -1.92
VAPBO95292 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.06□□□□□ -1.92
VAPBO95292 AC055876.1-202ENST00000567053 138 ntBASIC3.06□□□□□ -1.92
VAPBO95292 AC002546.1-201ENST00000588041 2504 ntBASIC3.06□□□□□ -1.92
VAPBO95292 AL109653.1-201ENST00000603091 248 ntBASIC3.06□□□□□ -1.92
VAPBO95292 AC113368.1-201ENST00000603736 382 ntBASIC3.06□□□□□ -1.92
VAPBO95292 AL390240.1-201ENST00000612950 384 ntBASIC3.06□□□□□ -1.92
VAPBO95292 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VAPBO95292 AL079305.1-201ENST00000623159 3008 ntBASIC3.06□□□□□ -1.92
VAPBO95292 AC092608.3-201ENST00000625017 386 ntBASIC3.06□□□□□ -1.92
VAPBO95292 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.06□□□□□ -1.92
VAPBO95292 AL590396.2-201ENST00000636511 1041 ntBASIC3.06□□□□□ -1.92
VAPBO95292 OR8B1P-202ENST00000641132 1178 ntBASIC3.06□□□□□ -1.92
VAPBO95292 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
VAPBO95292 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.05□□□□□ -1.92
VAPBO95292 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAPBO95292 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.05□□□□□ -1.92
VAPBO95292 SEC63P2-201ENST00000503863 1939 ntBASIC3.05□□□□□ -1.92
VAPBO95292 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.05□□□□□ -1.92
VAPBO95292 AC004925.1-201ENST00000624256 2706 ntBASIC3.05□□□□□ -1.92
VAPBO95292 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VAPBO95292 RNA5SP72-201ENST00000364442 117 ntBASIC3.05□□□□□ -1.92
VAPBO95292 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
VAPBO95292 Y_RNA.493-201ENST00000384422 102 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPBO95292 BMS1P22-201ENST00000414726 313 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AL158156.1-201ENST00000422509 473 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AL590623.1-201ENST00000427864 105 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.05□□□□□ -1.92
VAPBO95292 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.05□□□□□ -1.92
VAPBO95292 OR2B8P-201ENST00000432841 938 ntBASIC3.05□□□□□ -1.92
VAPBO95292 HIGD1AP11-201ENST00000438361 280 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC114878.1-201ENST00000441166 358 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC044797.1-201ENST00000445744 679 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPBO95292 snoU13.3-201ENST00000459441 104 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC093663.2-201ENST00000484625 313 ntBASIC3.05□□□□□ -1.92
VAPBO95292 RPL32P34-201ENST00000486380 400 ntBASIC3.05□□□□□ -1.92
VAPBO95292 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.05□□□□□ -1.92
VAPBO95292 HMGB1P22-201ENST00000505315 124 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC074250.1-201ENST00000511117 192 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC133963.2-201ENST00000513686 578 ntBASIC3.05□□□□□ -1.92
VAPBO95292 RNA5SP385-201ENST00000515947 110 ntBASIC3.05□□□□□ -1.92
VAPBO95292 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
VAPBO95292 SNORA31.20-201ENST00000517111 133 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC083923.1-201ENST00000523708 376 ntBASIC3.05□□□□□ -1.92
VAPBO95292 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAPBO95292 CR383656.14-201ENST00000551951 406 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPBO95292 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPBO95292 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPBO95292 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPBO95292 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPBO95292 AP001029.3-201ENST00000588063 596 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.05□□□□□ -1.92
VAPBO95292 MIR6075-201ENST00000620782 95 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC020923.1-201ENST00000624021 917 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.05□□□□□ -1.92
VAPBO95292 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VAPBO95292 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.05□□□□□ -1.92
VAPBO95292 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
VAPBO95292 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.05□□□□□ -1.92
VAPBO95292 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
VAPBO95292 AC010733.2-201ENST00000589496 5702 ntBASIC3.04□□□□□ -1.92
VAPBO95292 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.04□□□□□ -1.92
VAPBO95292 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VAPBO95292 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.04□□□□□ -1.92
VAPBO95292 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
VAPBO95292 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.04□□□□□ -1.92
VAPBO95292 ENSAP3-201ENST00000312710 333 ntBASIC3.04□□□□□ -1.92
VAPBO95292 RNU6-1339P-201ENST00000363574 91 ntBASIC3.04□□□□□ -1.92
VAPBO95292 RNU6-263P-201ENST00000363811 107 ntBASIC3.04□□□□□ -1.92
VAPBO95292 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.04□□□□□ -1.92
VAPBO95292 RNU4-78P-201ENST00000410940 126 ntBASIC3.04□□□□□ -1.92
VAPBO95292 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.04□□□□□ -1.92
VAPBO95292 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.04□□□□□ -1.92
VAPBO95292 MTCO3P12-201ENST00000416718 547 ntBASIC3.04□□□□□ -1.92
VAPBO95292 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.04□□□□□ -1.92
VAPBO95292 MTND4LP14-201ENST00000429447 288 ntBASIC3.04□□□□□ -1.92
VAPBO95292 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.04□□□□□ -1.92
VAPBO95292 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.04□□□□□ -1.92
VAPBO95292 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms