Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SRGAP3O43295 MTCO3P13-201ENST00000577757 781 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC005261.5-201ENST00000596280 355 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC007363.1-201ENST00000604736 620 ntBASIC5.49□□□□□ -1.53
SRGAP3O43295 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SRGAP3O43295 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.49□□□□□ -1.53
SRGAP3O43295 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SRGAP3O43295 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SRGAP3O43295 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.48□□□□□ -1.53
SRGAP3O43295 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 Y_RNA.1-201ENST00000352915 104 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 RNA5SP307-201ENST00000362863 116 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SRGAP3O43295 VN1R8P-201ENST00000407739 893 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 RNU6-195P-201ENST00000411352 109 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 BX890604.2-201ENST00000427883 474 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 NPM1P24-201ENST00000428039 894 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 RPEP2-201ENST00000432149 701 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC011998.1-201ENST00000433403 117 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC104850.1-201ENST00000435940 476 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 ARPC3P1-201ENST00000437218 533 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 SKP1P1-201ENST00000438081 489 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 PGBD4P3-201ENST00000440731 581 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC114495.1-201ENST00000441274 436 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 MTND6P13-201ENST00000443510 523 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.48□□□□□ -1.53
SRGAP3O43295 AC007677.1-201ENST00000445757 515 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 YWHAQP9-201ENST00000445891 512 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 PHBP16-201ENST00000446318 950 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC026412.2-201ENST00000512270 1075 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 HMGB1P19-201ENST00000517578 577 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.48□□□□□ -1.53
SRGAP3O43295 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.48□□□□□ -1.53
SRGAP3O43295 AC068587.4-201ENST00000533893 186 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 AC090751.1-201ENST00000566966 267 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.48□□□□□ -1.53
SRGAP3O43295 PART1_1.1-201ENST00000611761 217 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC140113.4-201ENST00000622087 222 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 FRG1KP-201ENST00000623592 341 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC007546.2-201ENST00000623996 360 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 MIR1321-201ENST00000637766 79 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 NEAT1-202ENST00000501122 22743 ntBASIC5.48□□□□□ -1.53
SRGAP3O43295 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SRGAP3O43295 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.48□□□□□ -1.53
SRGAP3O43295 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SRGAP3O43295 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SRGAP3O43295 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 FARSBP1-201ENST00000435808 1778 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.47□□□□□ -1.53
SRGAP3O43295 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SRGAP3O43295 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AC139713.2-215ENST00000641428 5037 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 RNU6-1085P-201ENST00000363576 107 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 RNA5SP509-201ENST00000364577 119 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 RNU6-483P-201ENST00000384088 108 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 VDAC1P9-201ENST00000412766 841 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 EEF1A1P40-201ENST00000412883 573 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 AC004690.1-201ENST00000418216 328 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AL513185.2-201ENST00000425543 193 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AC008850.1-201ENST00000427546 362 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.47□□□□□ -1.53
SRGAP3O43295 RPS29P17-201ENST00000430795 166 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 CBX1P1-201ENST00000440184 427 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 AC099563.1-201ENST00000456086 418 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 AC108022.1-201ENST00000493466 478 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms