Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
LHX6Q9UPM6 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 OR51A10P-201ENST00000307165 937 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AC007685.1-201ENST00000329806 452 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 Y_RNA.136-201ENST00000363444 102 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 RNA5SP472-201ENST00000363868 119 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 RNU4-56P-201ENST00000364700 142 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 SNORD51-201ENST00000384320 80 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 RN7SKP216-201ENST00000411050 312 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 BX510359.3-201ENST00000422168 306 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 RPL21P40-201ENST00000428586 483 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AL512844.2-201ENST00000433990 593 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AL133445.1-201ENST00000467051 452 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 RNU6-390P-201ENST00000516259 103 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 SNORA74.1-201ENST00000516320 180 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 RPL21P9-201ENST00000556149 474 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 RN7SL178P-201ENST00000582930 304 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 MIR548AC-201ENST00000585049 88 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AC124916.2-201ENST00000604416 224 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AC005828.6-201ENST00000606610 232 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AC004158.1-201ENST00000564508 4319 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 AC122713.2-201ENST00000624942 3335 ntBASIC6.53□□□□□ -1.36
LHX6Q9UPM6 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LHX6Q9UPM6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.52□□□□□ -1.36
LHX6Q9UPM6 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 AC022819.1-201ENST00000563495 3910 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 Y_RNA.238-201ENST00000364441 102 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 SNORA68-201ENST00000384437 133 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 SNORA40.19-201ENST00000390846 128 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 MIR513C-201ENST00000401352 84 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 RPL34P19-201ENST00000415903 342 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 FTH1P10-202ENST00000430907 550 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 MYL6P3-201ENST00000436904 432 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 RPL7AP71-201ENST00000451120 739 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 RN7SL284P-201ENST00000498823 275 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 SNORA25.12-201ENST00000516202 82 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 RNA5SP318-201ENST00000516352 92 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 RNU6-659P-201ENST00000516454 104 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 MIR4423-201ENST00000580922 80 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 DLD-214ENST00000639772 421 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 AC005225.5-201ENST00000623547 2225 ntBASIC6.52□□□□□ -1.37
LHX6Q9UPM6 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX6Q9UPM6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms