Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.4□□□□□ -1.87
NXF3Q9H4D5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.4□□□□□ -1.87
NXF3Q9H4D5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.4□□□□□ -1.87
NXF3Q9H4D5 PDCL2P2-201ENST00000533651 189 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.4□□□□□ -1.87
NXF3Q9H4D5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.4□□□□□ -1.87
NXF3Q9H4D5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NXF3Q9H4D5 AL451007.1-201ENST00000595491 289 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 AC135507.2-201ENST00000612443 309 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 AC007496.3-201ENST00000624987 3443 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
NXF3Q9H4D5 XPOTP1-201ENST00000443317 2398 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NXF3Q9H4D5 OR5BR1P-201ENST00000524992 1330 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 AC008432.1-201ENST00000615912 1320 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 MTND5P3-201ENST00000438536 1800 ntBASIC3.4□□□□□ -1.87
NXF3Q9H4D5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC138915.3-201ENST00000562908 1389 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC011978.2-201ENST00000569835 2054 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 SNORD67-201ENST00000390833 111 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AL122016.1-201ENST00000403365 367 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 PNRC2P1-201ENST00000423940 420 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC011242.1-201ENST00000433596 1158 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 CYCSP20-201ENST00000473154 315 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC104689.1-201ENST00000473356 768 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC016550.1-201ENST00000505348 785 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 RNU4-60P-201ENST00000517239 135 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC010306.1-201ENST00000523223 1117 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 C1DP5-201ENST00000525775 383 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC106734.1-201ENST00000568646 663 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AL137843.1-201ENST00000605078 385 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC008121.2-201ENST00000614647 523 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AP000943.4-201ENST00000622912 357 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 AC083865.1-201ENST00000636634 831 ntBASIC3.39□□□□□ -1.87
NXF3Q9H4D5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NXF3Q9H4D5 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 MIR16-2-201ENST00000362117 81 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 SNORA51.12-201ENST00000384448 134 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 MTATP6P31-201ENST00000406985 692 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 MTCO2P1-201ENST00000424648 477 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 NANOGNBP1-201ENST00000448444 480 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 RPL32P14-201ENST00000463196 378 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 RN7SL330P-201ENST00000469709 307 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC090071.1-201ENST00000507713 644 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 RNU6-334P-201ENST00000517072 102 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC009812.2-201ENST00000517657 457 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 PSMA2P1-201ENST00000526365 646 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 EIF4BP1-201ENST00000554881 351 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC010928.3-201ENST00000587712 541 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 DNAJC19P3-201ENST00000594491 331 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 MTATP6P2-201ENST00000603319 678 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC068880.4-201ENST00000623082 495 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC106858.1-201ENST00000637497 429 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 RIOK3P1-201ENST00000418778 1528 ntBASIC3.38□□□□□ -1.87
NXF3Q9H4D5 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NXF3Q9H4D5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms