Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CSH1-203ENST00000453363 632 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 RN7SL735P-201ENST00000471015 292 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 RN7SL144P-201ENST00000475761 295 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 RPL7AP11-201ENST00000486538 799 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 RN7SL547P-201ENST00000490793 290 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 AC006445.1-201ENST00000491925 405 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 AC078918.1-201ENST00000498515 228 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 IGLV1-41-201ENST00000519790 406 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 LINC02396-203ENST00000551922 525 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 AC009093.3-201ENST00000567688 351 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 MIR4518-201ENST00000580665 83 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 SNRPGP15-201ENST00000600149 222 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 RNA5SP357-201ENST00000607318 119 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 ZNF195-229ENST00000618467 440 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 AP005019.3-201ENST00000620418 560 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 NEAT1_2.1-201ENST00000620525 105 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 AC247036.7-201ENST00000639643 304 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 TUBBP10-201ENST00000427668 1301 ntBASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-3Q9BYR6 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 PNMA8C-201ENST00000617053 4255 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AC005332.5-201ENST00000591222 2919 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 MIR126-201ENST00000362291 85 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 Y_RNA.171-201ENST00000363760 102 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 MIR635-201ENST00000384830 98 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 TRBV7-6-201ENST00000390374 392 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 U3.18-201ENST00000390880 216 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AL135905.1-201ENST00000416120 801 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AL356387.2-201ENST00000422272 243 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 C11orf98P1-201ENST00000446114 318 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 RN7SL516P-201ENST00000496127 297 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AC114811.1-201ENST00000507207 168 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 TMEM92-202ENST00000507382 573 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 RNU6-948P-201ENST00000516374 107 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 RNA5SP33-201ENST00000516687 98 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 LYNX1-207ENST00000523332 600 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AC020611.1-201ENST00000537101 254 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AC100791.1-201ENST00000570408 324 ntTSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AC008739.2-201ENST00000597006 317 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 RNU6-90P-201ENST00000606352 106 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AC069200.1-201ENST00000609511 323 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AC103706.3-201ENST00000636297 85 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 AC132825.4-201ENST00000582527 3644 ntBASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-3Q9BYR6 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms