Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AL161781.1-201ENST00000354277 403 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 RNU6-1227P-201ENST00000383981 107 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 RNU6-456P-201ENST00000384493 107 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 ARF4P3-201ENST00000397387 509 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 U3.32-201ENST00000408116 212 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 OR9R1P-201ENST00000412200 877 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 MRPS21P2-201ENST00000424704 264 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC117522.3-201ENST00000507974 584 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AP005639.2-201ENST00000527592 928 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 PDCD5P1-201ENST00000543528 309 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AL110118.1-201ENST00000553543 400 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 NDUFB4P11-201ENST00000560510 395 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC037471.2-201ENST00000564941 598 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC010928.3-201ENST00000587712 541 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC010424.2-201ENST00000607594 443 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC135507.2-201ENST00000612443 309 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AL049794.2-201ENST00000616301 365 ntBASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
USPL1Q5W0Q7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USPL1Q5W0Q7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 RNU6-1097P-201ENST00000363586 107 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 RNU6-108P-201ENST00000365558 107 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 RNA5SP187-201ENST00000384400 119 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 DSTNP4-201ENST00000399472 474 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 RNA5SP345-201ENST00000410646 108 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 RPL12P34-201ENST00000424532 479 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 HSPE1P28-201ENST00000443139 211 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 MTND4P19-201ENST00000446659 478 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 RPS20P32-201ENST00000456044 356 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 APOOP2-201ENST00000461561 539 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 MTCO2P29-201ENST00000465212 189 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 TXNP6-201ENST00000510190 310 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 RNU6-1153P-201ENST00000516760 105 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AC133555.2-201ENST00000550213 292 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AC068831.4-201ENST00000556118 109 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AL049839.1-201ENST00000556151 657 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 LARP7P2-201ENST00000575306 125 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 MIR1254-2-201ENST00000579553 63 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AC108751.5-201ENST00000492880 1336 ntBASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USPL1Q5W0Q7 AL592148.3-201ENST00000608771 2646 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms