Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
AP3S2P59780 RNU6-339P-201ENST00000384310 107 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 SNORD3H-201ENST00000384486 214 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 MIR181B1-201ENST00000385240 110 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.61□□□□□ -1.99
AP3S2P59780 AL356057.2-201ENST00000403318 432 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
AP3S2P59780 RPL7P25-201ENST00000404151 721 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 RNU6-564P-201ENST00000410983 104 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.61□□□□□ -1.99
AP3S2P59780 AL513477.1-202ENST00000417061 214 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.61□□□□□ -1.99
AP3S2P59780 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 AC097499.1-201ENST00000444277 208 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.61□□□□□ -1.99
AP3S2P59780 RBMY2UP-201ENST00000453474 324 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AC234775.1-201ENST00000454247 670 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 RPL21P41-201ENST00000459863 264 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AC025518.1-201ENST00000479856 347 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AC073522.1-201ENST00000483312 377 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 RN7SL20P-201ENST00000488827 297 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AC008885.2-201ENST00000509506 930 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 SNORA31.8-201ENST00000516327 108 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AC026241.1-201ENST00000517873 2142 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 HMGB1P23-201ENST00000518743 568 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 OR5G4P-201ENST00000525251 760 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 ELOCP31-201ENST00000540463 467 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.61□□□□□ -1.99
AP3S2P59780 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.61□□□□□ -1.99
AP3S2P59780 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.61□□□□□ -1.99
AP3S2P59780 RN7SL339P-201ENST00000580597 296 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.61□□□□□ -1.99
AP3S2P59780 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.61□□□□□ -1.99
AP3S2P59780 AC010620.2-201ENST00000600135 313 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AC015849.2-201ENST00000605738 409 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.61□□□□□ -1.99
AP3S2P59780 AL020991.1-201ENST00000612314 373 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 AL162574.2-201ENST00000614618 657 ntBASIC2.61□□□□□ -1.99
AP3S2P59780 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.61□□□□□ -1.99
AP3S2P59780 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.61□□□□□ -1.99
AP3S2P59780 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.61□□□□□ -1.99
AP3S2P59780 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.61□□□□□ -1.99
AP3S2P59780 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
AP3S2P59780 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
AP3S2P59780 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.61□□□□□ -1.99
AP3S2P59780 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
AP3S2P59780 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
AP3S2P59780 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
AP3S2P59780 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
AP3S2P59780 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.6□□□□□ -1.99
AP3S2P59780 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.6□□□□□ -1.99
AP3S2P59780 AL672167.1-206ENST00000356293 943 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 RNU4-35P-201ENST00000362588 141 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 RNU6-1249P-201ENST00000363237 111 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.6□□□□□ -1.99
AP3S2P59780 AL357075.1-201ENST00000404107 726 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 U3.42-201ENST00000408746 214 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 AL137014.1-201ENST00000420490 1226 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.6□□□□□ -1.99
AP3S2P59780 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.6□□□□□ -1.99
AP3S2P59780 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.6□□□□□ -1.99
AP3S2P59780 AC233982.1-201ENST00000451247 436 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
AP3S2P59780 SBDSP1-204ENST00000453858 737 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.6□□□□□ -1.99
AP3S2P59780 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
AP3S2P59780 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 MIR2116-201ENST00000517221 80 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 AC092470.1-201ENST00000546187 132 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 AC107016.2-201ENST00000547968 190 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.6□□□□□ -1.99
AP3S2P59780 HSPE1P5-201ENST00000561489 272 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 EIF5A2P1-201ENST00000564027 460 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 AC034105.3-201ENST00000565294 442 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 MIR2682-201ENST00000580305 110 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.6□□□□□ -1.99
AP3S2P59780 MIMT1-201ENST00000597105 1050 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 U73023.1-201ENST00000603134 700 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 AC024940.4-201ENST00000605507 246 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 AC084036.1-201ENST00000609190 508 ntBASIC2.6□□□□□ -1.99
AP3S2P59780 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.6□□□□□ -1.99
AP3S2P59780 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
AP3S2P59780 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
AP3S2P59780 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
AP3S2P59780 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.59□□□□□ -1.99
AP3S2P59780 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.59□□□□□ -1.99
AP3S2P59780 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
AP3S2P59780 RNA5SP283-201ENST00000365604 119 ntBASIC2.59□□□□□ -1.99
AP3S2P59780 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
AP3S2P59780 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
AP3S2P59780 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms