Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RPL23AP64-201ENST00000469465 435 ntBASIC9.94□□□□□ -0.82
MSH5O43196 AC022493.1-201ENST00000492984 337 ntBASIC9.94□□□□□ -0.82
MSH5O43196 RN7SL649P-201ENST00000496974 275 ntBASIC9.94□□□□□ -0.82
MSH5O43196 AC093331.1-201ENST00000521474 169 ntBASIC9.94□□□□□ -0.82
MSH5O43196 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
MSH5O43196 COX4I1P1-201ENST00000554239 509 ntBASIC9.94□□□□□ -0.82
MSH5O43196 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC9.94□□□□□ -0.82
MSH5O43196 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC9.94□□□□□ -0.82
MSH5O43196 AL139395.1-201ENST00000603662 160 ntBASIC9.94□□□□□ -0.82
MSH5O43196 7SK.12-201ENST00000612820 244 ntBASIC9.94□□□□□ -0.82
MSH5O43196 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
MSH5O43196 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC9.94□□□□□ -0.82
MSH5O43196 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
MSH5O43196 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC9.94□□□□□ -0.82
MSH5O43196 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC9.93□□□□□ -0.82
MSH5O43196 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MSH5O43196 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
MSH5O43196 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.93□□□□□ -0.82
MSH5O43196 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
MSH5O43196 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC9.93□□□□□ -0.82
MSH5O43196 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
MSH5O43196 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
MSH5O43196 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MSH5O43196 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.93□□□□□ -0.82
MSH5O43196 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.93□□□□□ -0.82
MSH5O43196 AC024587.1-201ENST00000505925 2157 ntBASIC9.93□□□□□ -0.82
MSH5O43196 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MSH5O43196 RNU6-978P-201ENST00000364371 103 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC9.93□□□□□ -0.82
MSH5O43196 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC9.93□□□□□ -0.82
MSH5O43196 LINC00328-2P-201ENST00000436585 219 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC9.93□□□□□ -0.82
MSH5O43196 Z95327.1-201ENST00000446082 482 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AC010655.1-201ENST00000449336 292 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC9.93□□□□□ -0.82
MSH5O43196 RNU6-625P-201ENST00000459412 107 ntBASIC9.93□□□□□ -0.82
MSH5O43196 RN7SL36P-201ENST00000469345 276 ntBASIC9.93□□□□□ -0.82
MSH5O43196 RPS4XP1-201ENST00000482189 787 ntBASIC9.93□□□□□ -0.82
MSH5O43196 RN7SL635P-201ENST00000492123 296 ntBASIC9.93□□□□□ -0.82
MSH5O43196 UBE2CP3-201ENST00000502715 450 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC9.93□□□□□ -0.82
MSH5O43196 AC139365.2-201ENST00000517972 253 ntBASIC9.93□□□□□ -0.82
MSH5O43196 TRAV37-201ENST00000553906 342 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AC005476.1-201ENST00000554427 397 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AC115085.1-201ENST00000588924 229 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AC007136.1-201ENST00000589141 199 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AC000068.3-201ENST00000607934 427 ntBASIC9.93□□□□□ -0.82
MSH5O43196 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
MSH5O43196 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MSH5O43196 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
MSH5O43196 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
MSH5O43196 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
MSH5O43196 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.92□□□□□ -0.82
MSH5O43196 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC9.92□□□□□ -0.82
MSH5O43196 CYP2G2P-201ENST00000594920 1485 ntBASIC9.92□□□□□ -0.82
MSH5O43196 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
MSH5O43196 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MSH5O43196 RNA5SP396-201ENST00000364834 120 ntBASIC9.92□□□□□ -0.82
MSH5O43196 PRELID1P1-201ENST00000403549 660 ntBASIC9.92□□□□□ -0.82
MSH5O43196 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC9.92□□□□□ -0.82
MSH5O43196 NDUFB4P6-201ENST00000436819 366 ntBASIC9.92□□□□□ -0.82
MSH5O43196 AL356121.1-201ENST00000442911 156 ntBASIC9.92□□□□□ -0.82
MSH5O43196 AC009244.1-201ENST00000450566 258 ntBASIC9.92□□□□□ -0.82
MSH5O43196 GOT2P2-201ENST00000450663 1251 ntBASIC9.92□□□□□ -0.82
MSH5O43196 RPL23AP70-201ENST00000483361 460 ntBASIC9.92□□□□□ -0.82
MSH5O43196 AC020593.1-201ENST00000507399 299 ntBASIC9.92□□□□□ -0.82
MSH5O43196 RN7SKP57-201ENST00000517248 293 ntBASIC9.92□□□□□ -0.82
MSH5O43196 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC9.92□□□□□ -0.82
MSH5O43196 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC9.92□□□□□ -0.82
MSH5O43196 uc_338.9-201ENST00000617424 182 ntBASIC9.92□□□□□ -0.82
MSH5O43196 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC9.92□□□□□ -0.82
MSH5O43196 PSMD5-AS1-215ENST00000640622 205 ntBASIC9.92□□□□□ -0.82
MSH5O43196 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC9.92□□□□□ -0.82
MSH5O43196 MAPK10-323ENST00000641493 3207 ntBASIC9.92□□□□□ -0.82
MSH5O43196 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MSH5O43196 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC9.92□□□□□ -0.82
MSH5O43196 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9.92□□□□□ -0.82
MSH5O43196 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MSH5O43196 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
MSH5O43196 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
MSH5O43196 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC9.91□□□□□ -0.82
MSH5O43196 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC9.91□□□□□ -0.82
MSH5O43196 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
MSH5O43196 AC022819.1-201ENST00000563495 3910 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms