Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RPL12P49-201ENST00000441100 121 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 BTF3P6-201ENST00000448054 499 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 RNU7-182P-201ENST00000459009 62 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC092754.1-201ENST00000472975 479 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 LSM3P4-201ENST00000502948 309 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC093767.1-201ENST00000504523 156 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 SMURF2P1-201ENST00000514992 481 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 RN7SKP99-201ENST00000517028 307 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 OR5D15P-201ENST00000531671 942 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC024224.1-201ENST00000538284 609 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC068993.1-201ENST00000546724 589 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 SETP2-201ENST00000553886 926 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AL117187.1-201ENST00000555482 181 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 CYP2C61P-201ENST00000604072 290 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC010424.2-201ENST00000607594 443 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC092807.2-201ENST00000609367 243 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC090425.1-201ENST00000610007 140 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 uc_338.29-201ENST00000615099 168 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC087588.2-201ENST00000617667 426 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC007603.3-201ENST00000636915 979 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AL138713.1-201ENST00000624026 2130 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSU72Q9NP77 AP001350.1-201ENST00000601906 1524 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSU72Q9NP77 RNA5SP273-201ENST00000362484 113 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 Y_RNA.112-201ENST00000363250 102 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 RNU1-65P-201ENST00000363919 148 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 RNU6-1029P-201ENST00000384109 107 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AL121834.1-202ENST00000404494 277 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 MIR1203-201ENST00000408812 85 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC099535.1-201ENST00000408928 371 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 RNU6-370P-201ENST00000411008 104 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 RNU2-22P-201ENST00000411266 212 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC113412.1-201ENST00000425840 504 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 MED13P1-201ENST00000428342 171 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 SNRPEP4-201ENST00000435815 279 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 GAPDHP58-201ENST00000438477 1006 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 NOP56P2-201ENST00000447491 769 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 RPL7P52-201ENST00000449200 742 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC091685.2-201ENST00000454924 864 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC079168.1-201ENST00000458741 345 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC104057.1-201ENST00000515547 497 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 FTH1P11-201ENST00000517577 551 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 MIR4504-201ENST00000577413 92 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC090615.1-201ENST00000577519 154 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC008782.1-201ENST00000603386 430 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC113194.1-201ENST00000606037 500 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 MIR6721-201ENST00000617181 87 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC007546.1-201ENST00000619452 559 ntBASIC5.34□□□□□ -1.55
SSU72Q9NP77 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSU72Q9NP77 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.34□□□□□ -1.55
SSU72Q9NP77 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSU72Q9NP77 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSU72Q9NP77 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSU72Q9NP77 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSU72Q9NP77 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSU72Q9NP77 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SSU72Q9NP77 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSU72Q9NP77 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSU72Q9NP77 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSU72Q9NP77 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms