Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 SBDSP1-204ENST00000453858 737 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC097493.1-201ENST00000463958 372 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC006967.1-201ENST00000467608 589 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC108751.2-201ENST00000469993 231 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL161747.1-201ENST00000480068 358 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC112204.1-201ENST00000502591 103 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC013828.2-201ENST00000532487 235 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC079075.1-201ENST00000559543 878 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 MIR544B-201ENST00000582372 78 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC245014.2-201ENST00000603689 287 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL133338.2-201ENST00000604292 736 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC246785.4-201ENST00000605374 287 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL356274.1-201ENST00000617064 410 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC002550.2-201ENST00000621246 394 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 U3.53-201ENST00000628922 216 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC110994.2-201ENST00000635481 492 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC021146.4-201ENST00000309229 279 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 SNRPEP3-201ENST00000338402 276 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 RNU6-251P-201ENST00000363235 104 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 OR52E6-202ENST00000379946 954 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 Y_RNA.481-201ENST00000384373 102 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 SNORA51.12-201ENST00000384448 134 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 RNU6-809P-201ENST00000384461 107 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AL359643.1-201ENST00000404109 423 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 MIR1305-201ENST00000408300 86 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 COX6CP17-201ENST00000421389 185 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 SKP1P1-201ENST00000438081 489 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 CACYBPP1-201ENST00000438592 684 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AL589765.3-201ENST00000446084 462 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 RPL23AP20-201ENST00000447965 421 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC010326.1-201ENST00000462726 602 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC007182.2-201ENST00000489251 402 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC139783.2-201ENST00000504847 1145 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC007016.1-201ENST00000512110 244 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 RNU6-1281P-201ENST00000516223 105 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AP001180.3-201ENST00000582221 145 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 BNIP3P23-201ENST00000599655 511 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 AP000942.4-201ENST00000604811 241 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC139792.3-201ENST00000623525 224 ntBASIC4.53□□□□□ -1.68
VRK3Q8IV63 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms