Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 HMGB1P11-201ENST00000413899 637 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 RPL36AP36-201ENST00000418616 301 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 COX6CP2-201ENST00000444980 225 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AL121877.1-201ENST00000453704 622 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC133473.1-201ENST00000455173 299 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC087385.1-201ENST00000475062 312 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC116337.2-201ENST00000477662 156 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC073073.1-201ENST00000493920 463 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC114981.1-201ENST00000503897 678 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC109458.1-201ENST00000508858 316 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC104057.1-201ENST00000515547 497 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC245505.1-201ENST00000556398 224 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AL133241.1-201ENST00000556832 487 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC100793.4-201ENST00000613683 429 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 U6atac.1-201ENST00000616025 117 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC034229.5-201ENST00000624258 185 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC022893.2-201ENST00000564832 3296 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC068254.2-201ENST00000623938 3577 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC130650.2-201ENST00000618736 2403 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC135352.1-201ENST00000506173 1418 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.71□□□□□ -1.65
SLC44A4Q53GD3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.71□□□□□ -1.65
SLC44A4Q53GD3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SLC44A4Q53GD3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SLC44A4Q53GD3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 LINC00561-201ENST00000565815 2738 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 Y_RNA.6-201ENST00000362350 114 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 RNU5F-6P-201ENST00000362979 116 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 RNU6-1119P-201ENST00000384349 108 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 SDHCP2-201ENST00000398565 501 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 SSXP10-201ENST00000402595 565 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 HDGFP1-201ENST00000405943 252 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 RPL23AP26-201ENST00000412728 464 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 CDK8P2-201ENST00000415020 547 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC004448.2-201ENST00000422360 586 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AL035410.1-201ENST00000427409 427 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 OR4C10P-201ENST00000434991 931 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 CFTRP1-201ENST00000456646 183 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 RPS20P21-201ENST00000466859 343 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 UQCRHP4-201ENST00000471686 272 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 RN7SL604P-201ENST00000492589 296 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC020593.1-201ENST00000507399 299 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 PARP4P3-201ENST00000510265 317 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC087477.6-201ENST00000559595 843 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 PCMTD1P2-201ENST00000565017 355 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 MIR4512-201ENST00000583257 77 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC087683.1-201ENST00000591187 441 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC090181.2-201ENST00000602975 672 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AL513477.2-201ENST00000607858 568 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AP001596.2-201ENST00000608410 312 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AC012360.2-201ENST00000609349 391 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms