Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 NANOGP2-201ENST00000435391 727 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 AC007967.1-201ENST00000455422 1159 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC8P31273 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 RNU6-885P-201ENST00000516607 104 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 IGHV3-32-201ENST00000519182 355 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC8P31273 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC8P31273 AC009237.15-201ENST00000610252 501 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 AC091304.6-201ENST00000619761 202 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXC8P31273 AL392088.2-201ENST00000637607 285 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
HOXC8P31273 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC8P31273 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC8P31273 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HOXC8P31273 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 ZNF734P-201ENST00000419494 1534 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HOXC8P31273 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HOXC8P31273 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HOXC8P31273 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 AL356274.2-201ENST00000624379 3752 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 SNORD9-201ENST00000362566 104 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 RNU6-1066P-201ENST00000363573 105 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 RNU4-51P-201ENST00000364206 140 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
HOXC8P31273 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.1□□□□□ -1.75
HOXC8P31273 RNA5SP424-201ENST00000390988 115 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AL121972.1-201ENST00000402023 252 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC009237.2-201ENST00000421358 284 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC8P31273 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC8P31273 AC069285.2-201ENST00000440210 275 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 MTND2P22-201ENST00000444325 1033 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 HMGB3P6-201ENST00000444896 598 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC006480.1-201ENST00000449887 378 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 RPS20P32-201ENST00000456044 356 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC8P31273 AC010307.1-201ENST00000467206 836 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC069528.1-202ENST00000482888 637 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AL358832.1-201ENST00000497800 389 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC091951.3-201ENST00000504093 246 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC074250.1-201ENST00000511117 192 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC8P31273 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC8P31273 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC8P31273 AC007458.1-201ENST00000542812 373 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.1□□□□□ -1.75
HOXC8P31273 AC015688.2-201ENST00000584523 262 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC061975.8-201ENST00000587058 721 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC8P31273 BNIP3P24-201ENST00000593398 557 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 IGHV3-29-201ENST00000604817 344 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AL139344.1-201ENST00000605228 195 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AL592148.2-201ENST00000612210 372 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 AL591424.2-201ENST00000617023 128 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC8P31273 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 MTND4P26-201ENST00000415971 1359 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 ZNF876P-202ENST00000398732 1485 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 MTCO1P12-201ENST00000414273 1543 ntBASIC4.1□□□□□ -1.75
HOXC8P31273 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
HOXC8P31273 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC8P31273 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXC8P31273 AC073346.2-201ENST00000624724 2058 ntBASIC4.09□□□□□ -1.75
HOXC8P31273 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC8P31273 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC8P31273 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HOXC8P31273 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC8P31273 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms