Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 AC018445.3-201ENST00000624177 1945 ntBASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 CD177P1-201ENST00000606252 935 ntBASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 AC098818.2-201ENST00000564925 2320 ntBASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCA3PQ9Y6N3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 CR392000.1-201ENST00000624770 1228 ntBASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 KRT16P1-201ENST00000399124 1418 ntBASIC18.15■□□□□ 0.5
CLCA3PQ9Y6N3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CLCA3PQ9Y6N3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.14■□□□□ 0.5
CLCA3PQ9Y6N3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCA3PQ9Y6N3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCA3PQ9Y6N3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.14■□□□□ 0.5
CLCA3PQ9Y6N3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 FAM197Y1-201ENST00000421178 764 ntBASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 AC113410.3-201ENST00000623366 203 ntBASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCA3PQ9Y6N3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLCA3PQ9Y6N3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms