Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
HCFC2Q9Y5Z7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HCFC2Q9Y5Z7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HCFC2Q9Y5Z7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HCFC2Q9Y5Z7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HCFC2Q9Y5Z7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HCFC2Q9Y5Z7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.11■□□□□ 0.81
HCFC2Q9Y5Z7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 RASA4DP-201ENST00000460726 1199 ntBASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HCFC2Q9Y5Z7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 AC092597.1-201ENST00000487352 616 ntBASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC2Q9Y5Z7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 MIR3652-201ENST00000579335 131 ntBASIC20.08■□□□□ 0.81
HCFC2Q9Y5Z7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HCFC2Q9Y5Z7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HCFC2Q9Y5Z7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.08■□□□□ 0.8
HCFC2Q9Y5Z7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
HCFC2Q9Y5Z7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HCFC2Q9Y5Z7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
HCFC2Q9Y5Z7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms