Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 AL121906.2-201ENST00000621597 723 ntBASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 AC018445.3-201ENST00000624177 1945 ntBASIC18.96■□□□□ 0.63
PCDHGA4Q9Y5G9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 MMP23A-201ENST00000234610 1017 ntBASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA4Q9Y5G9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 AF186192.3-201ENST00000583427 947 ntBASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 AL121829.2-201ENST00000620908 328 ntBASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 AC018553.1-201ENST00000616682 1458 ntBASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 AC120498.9-201ENST00000339021 3867 ntBASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 AL356309.3-201ENST00000624132 1934 ntBASIC18.94■□□□□ 0.62
PCDHGA4Q9Y5G9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 AP001271.2-201ENST00000624018 1556 ntBASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 ARMC10P1-201ENST00000313754 855 ntBASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 RN7SL275P-201ENST00000582762 335 ntBASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 HTR7P1-201ENST00000538670 1336 ntBASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA4Q9Y5G9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 MTND2P7-201ENST00000521337 640 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms