Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 TERF1P5-201ENST00000477545 1207 ntBASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 AC100791.3-201ENST00000617619 330 ntBASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGB1Q9Y5G3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHGB1Q9Y5G3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDHGB1Q9Y5G3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB1Q9Y5G3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB1Q9Y5G3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB1Q9Y5G3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB1Q9Y5G3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB1Q9Y5G3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB1Q9Y5G3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 UBE2DNL-204ENST00000602536 740 ntBASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB1Q9Y5G3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 ABALON-201ENST00000629058 1903 ntBASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 AC067852.2-201ENST00000590513 2313 ntBASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 PHGDH-210ENST00000641115 1638 ntBASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGB1Q9Y5G3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 MCRIP2P1-201ENST00000394346 511 ntBASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 AC016769.1-201ENST00000409132 1010 ntBASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms