Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 KRT16P1-201ENST00000399124 1418 ntBASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 AC005521.1-201ENST00000393351 872 ntBASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 CR392000.1-201ENST00000624770 1228 ntBASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB11Q9Y5F2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 AL137013.1-201ENST00000432946 1228 ntBASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 C1QL1P1-201ENST00000568105 661 ntBASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 AC079598.2-202ENST00000546624 1451 ntBASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB11Q9Y5F2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 AC113347.1-201ENST00000413321 391 ntBASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB11Q9Y5F2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB11Q9Y5F2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms