Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHB2Q9Y5E7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 AC128688.1-201ENST00000487626 519 ntBASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 AC010203.1-204ENST00000548782 407 ntBASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB2Q9Y5E7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 AL049597.2-201ENST00000565575 961 ntBASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB2Q9Y5E7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 AL445228.2-201ENST00000605589 952 ntBASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 FAM87A-204ENST00000613235 858 ntBASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB2Q9Y5E7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHB2Q9Y5E7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHB2Q9Y5E7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHB2Q9Y5E7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDHB2Q9Y5E7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDHB2Q9Y5E7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHB2Q9Y5E7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDHB2Q9Y5E7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDHB2Q9Y5E7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 LIN28AP1-201ENST00000429574 405 ntBASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PCDHB2Q9Y5E7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB2Q9Y5E7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCDHB2Q9Y5E7 KRT8P41-201ENST00000533985 1514 ntBASIC21■□□□□ 0.95
PCDHB2Q9Y5E7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB2Q9Y5E7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB2Q9Y5E7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCDHB2Q9Y5E7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms