Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00588Q9Y4M8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 KRT8P11-201ENST00000409686 1436 ntBASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 AC010203.1-204ENST00000548782 407 ntBASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 FAM87A-204ENST00000613235 858 ntBASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00588Q9Y4M8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 AC073508.3-201ENST00000619697 1419 ntBASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 PRSS44-201ENST00000515154 1146 ntBASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00588Q9Y4M8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 SDHAP1-207ENST00000440850 2000 ntBASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00588Q9Y4M8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms