Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF6Q9Y252 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF6Q9Y252 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF6Q9Y252 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF6Q9Y252 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF6Q9Y252 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
RNF6Q9Y252 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF6Q9Y252 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 MTDHP1-201ENST00000605323 784 ntBASIC18.07■□□□□ 0.48
RNF6Q9Y252 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF6Q9Y252 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF6Q9Y252 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.06■□□□□ 0.48
RNF6Q9Y252 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 AL023875.1-201ENST00000640777 796 ntBASIC18.06■□□□□ 0.48
RNF6Q9Y252 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 AC007613.1-201ENST00000572811 2597 ntBASIC18.06■□□□□ 0.48
RNF6Q9Y252 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF6Q9Y252 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF6Q9Y252 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 ECEL1P3-201ENST00000427961 737 ntBASIC18.05■□□□□ 0.48
RNF6Q9Y252 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 AC120498.8-201ENST00000614275 531 ntBASIC18.05■□□□□ 0.48
RNF6Q9Y252 AC006557.6-201ENST00000623071 864 ntBASIC18.05■□□□□ 0.48
RNF6Q9Y252 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF6Q9Y252 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms