Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 PALM-208ENST00000592155 2272 ntTSL 4 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 HBZP1-201ENST00000354915 429 ntBASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
CDK11AQ9UQ88 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDK11AQ9UQ88 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDK11AQ9UQ88 TSPY21P-201ENST00000433481 731 ntBASIC29.7■■■□□ 2.35
CDK11AQ9UQ88 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDK11AQ9UQ88 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC29.7■■■□□ 2.35
CDK11AQ9UQ88 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
CDK11AQ9UQ88 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CDK11AQ9UQ88 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDK11AQ9UQ88 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 AC026396.1-201ENST00000419388 421 ntBASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 AC034232.1-201ENST00000506026 1064 ntBASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC29.69■■■□□ 2.34
CDK11AQ9UQ88 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 BCL10-202ENST00000620248 774 ntTSL 5 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDK11AQ9UQ88 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 TSPY23P-201ENST00000440136 739 ntBASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 RASA4DP-201ENST00000460726 1199 ntBASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 AL691432.3-201ENST00000621860 400 ntBASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 ZNF815P-204ENST00000434898 1737 ntBASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDK11AQ9UQ88 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms