Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 AL353807.1-201ENST00000427475 662 ntBASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 AC128676.1-201ENST00000454392 318 ntBASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 AC133681.1-201ENST00000465482 601 ntBASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 RN7SL471P-201ENST00000580476 299 ntBASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 AC110285.5-201ENST00000611501 352 ntBASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 AC073648.6-201ENST00000641589 218 ntBASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00474Q9P2X8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 AC124283.5-201ENST00000624661 1809 ntBASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 FAM197Y4-202ENST00000622692 608 ntBASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 AL135905.2-201ENST00000584934 1404 ntBASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 AR-207ENST00000612010 3896 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
LINC00474Q9P2X8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms