Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 AC092647.4-201ENST00000457211 535 ntBASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.82■□□□□ 0.6
NLGN3Q9NZ94 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 CKBP1-201ENST00000565489 1086 ntBASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 AL031432.5-201ENST00000641059 760 ntBASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NLGN3Q9NZ94 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.8■□□□□ 0.6
NLGN3Q9NZ94 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 KRT8P41-201ENST00000533985 1514 ntBASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 AL358472.4-201ENST00000633140 710 ntBASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NLGN3Q9NZ94 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms